| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3648 |
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| Symbol | |
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| ID | 4280541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4326972 |
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| End bp | 4327973 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136461 |
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| Product | transcriptional regulator, AraC family protein |
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| Protein accession | YP_752314 |
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| Protein GI | 114564800 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTTC GCAGCATTAC CAGTGTGCAA ATTATTGTGT CCTATGGCAT TGAGCAGGGC
ATTGAGCAAG AGCGGTTGCT GCAAGGGTCT GGTTTGGTGG GCGCCCAATT AACCGATCAC
GAGCAATTGG TTGAAGAAAA ACAAGAATTA CAGGTGTTAA ATAACCTCAT GCTCAATACT
TCATGCCCAT TCAAGGTTGG AATGGAGTTA GGTTGCCGTT ATCACCTGAC CAGTTATGGC
ATCATGGGTT ATGCTCTATT GGCGAGCAGC ACTGCGAGAA AGGCGATTGA ATTAGGCTTA
CGTTATCTAG ATTTAACCTA TGTTTTTTCA CAGATAACAT TAACTGAGCT TAAGGACGAT
TTATCCCTAA GGTTCTCATG CGACATTCCT GGTGAGTTAG GTGAACTGGT GTTAGTTAGA
GACATGTTGG GCGCTGCGAT GATCCAACGA GAAGTATTTG AAAGTAACGA CTTACCGATA
AAATTGCAGT TTACGTCGCC TCAGCCCGCA GGCTTGTCAC TCGAAGGTAT AAAGCAAAAA
CTGGGTGCTG AGATCCAATT CAATGCTAGT TATAACGGTT TTACTGGATT AACACCGCTA
TTAGATCTGC CATTATTAAA AGCCAATGAA GCCACCGCCA GATTATGTGA GGCGCAATGC
AACCAGCTAC TGCAACAAAA GCAAAACTGG AACCCTGTTG CTAAGTTGGT CAAAGACACC
TTAGTACACT TAGGCTTAGC AGCATCAATG GAAGATATCG CCCAGCATTT GGCTCGAACG
ACTCGCACTT TGCATCGTCA ACTAACACTA GAACAAACCA GTTGGCGCCA GGTGCGTGAC
GATGTGCGTT TTGGCATAGC CGAAGTGTTA TTATTAACGC CGATGCAACT TGATGAAATA
GCCGAACGCC TTGGTTTTAG TGATGGGGCC AATTTTAGCC ACAGCTTTAA GCGCTGCAAA
AATATAACCC CAAGCCAGTA TCGAAAGCAG GCGAAAAAAT AG
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| Protein sequence | MTFRSITSVQ IIVSYGIEQG IEQERLLQGS GLVGAQLTDH EQLVEEKQEL QVLNNLMLNT
SCPFKVGMEL GCRYHLTSYG IMGYALLASS TARKAIELGL RYLDLTYVFS QITLTELKDD
LSLRFSCDIP GELGELVLVR DMLGAAMIQR EVFESNDLPI KLQFTSPQPA GLSLEGIKQK
LGAEIQFNAS YNGFTGLTPL LDLPLLKANE ATARLCEAQC NQLLQQKQNW NPVAKLVKDT
LVHLGLAASM EDIAQHLART TRTLHRQLTL EQTSWRQVRD DVRFGIAEVL LLTPMQLDEI
AERLGFSDGA NFSHSFKRCK NITPSQYRKQ AKK
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