Gene Sfri_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3643 
Symbol 
ID4280536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4323288 
End bp4323779 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content44% 
IMG OID638136456 
Producttranscriptional regulator, MarR family protein 
Protein accessionYP_752309 
Protein GI114564795 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGATA TTGATAGAGT TGTAGCGCAA TGGGACGAAC AAAAGCCGCA TTTAGATACT 
GAGCCAATGG CGATTCTTGG GCGTTTTTTG CGTTTGCAAA AACACATAGA GGCTGAAATA
TCAGCTTGTC ATAAGCAGTT TGACCTGACT ATGGGTGAGT TTGATGTACT GGCGACATTA
AGACGTAATG GTAAACCTTA CACCTTAACC CCTTCGAAAT TATTATCGTC GATGATGTTA
ACGTCTGGCG CGATGACAAA TCGTTTAGAC AAGCTTGAAT CTAAAGACTT AATTGCACGC
GTACACAGCA CTGAAGACAG GCGCAGCGTA TCGGTAGCTT TGACTAACAA AGGCCTTGCC
ATTATAGATG AAGCGATTGA GGAGCACGTA CGCATTCAAC ACAAACTGGT GGCAAGCCTT
TCAGATTCTG AACTGCCCGA GCTCAACCAA TTGTTCAAAA CCTGGTTAGC TGGTTTTGAA
GGCAATCAAT AG
 
Protein sequence
MEDIDRVVAQ WDEQKPHLDT EPMAILGRFL RLQKHIEAEI SACHKQFDLT MGEFDVLATL 
RRNGKPYTLT PSKLLSSMML TSGAMTNRLD KLESKDLIAR VHSTEDRRSV SVALTNKGLA
IIDEAIEEHV RIQHKLVASL SDSELPELNQ LFKTWLAGFE GNQ