| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3605 |
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| Symbol | |
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| ID | 4280498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4279047 |
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| End bp | 4280387 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136417 |
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| Product | amidohydrolase |
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| Protein accession | YP_752271 |
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| Protein GI | 114564757 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.202541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTGCT TACGTGTTGC GTACCCCTTA TTGGCGTTAG TGTTTTCAGC TTCGTCGTTG
TCTGTTACTG CTAGTGCGAG CGATCTTGAT CTCTCTGTAA GTAAAGCGTT ACCAAAGCTT
GAGCAGCTTT ATTTACATCT TCATCAACAC CCTGAATTGT CATATCAAGA AAAAGCCACT
AGCCAACGTA TGGCGCAAGA ACTCAAGCAA TTAGGCTTTG AGGTTACGTC TAATTTTGGC
GGTTATGGTG TGGTTGGTAT TGTCAAAAAC GGTAATGGAC CCGTGGTGAT GATCCGTGCA
GATATTGATG GCTTACCCAT TATTGAGCAA ACGGGAAAAG AGTACGCATC GACCGTGACA
ACCCTTAATG CGGACAACAG TACCGTTGGT ATTATGCATG GTTGCGGCCA CGATATTCAC
ATGACCAGTT TAATTGGTAC TGCACAGCAA CTGATGCTTC ACAAAGCCGA CTGGCAAGGT
ACTTTGATGA TGGTGGCTCA ACCAGCAGAA GAAGTCGGTG GCGGCGCCAA AGCCATGCTT
AAACAGGGTT TGTTTAGCCA GTTTCCAACA CCAGACAGCA TTATTGGTTT GCATGTTAGT
GCGTCAATTC CTGCAGGAAA AGTAGGCACG GTAAGTGGTT ATGCCCTGGC CAATGTTGAT
TCGGTTGATA TTACCATTAA GGGCAAAGGT GGCCATGGCG CCTATCCGCA CGTCACTATC
GATCCTGTGG TACTTGCAGC GCGCACAGTA CTTGCACTGC AAACCATTGT TAGCCGCGAG
GTCTCGCCGT TAGAGCCTAA TGTGGTTACT GTTGGGTCTA TTCATGGCGG CTCAAAGCAC
AATATTATTT CAGATGAAGT GAAGCTTCAG CTCACCTTAC GCTCGTATAA CCCTAAGGTT
CGTGAGCAGC AAATAGCGGC GATTAAACGT ATTACTACCG GTATCGCGAT TAGTGCTGGC
TTGCCAGATG ACCTTATGCC TGTGGTGTAT GTACATGATG ATGAAACCAT TCCGTCAACC
TATAACGATC CTACGTTAGC CGCTAAGGTT AAAGCCAGTA TTGAAGCCGA GTTAGGCAGT
GACAATGTGC TGGTGGCACC GCCAGTAATG GCTGGCGAAG ATTTTGGTTT ATATGGGCTC
ACACCACAGA AACGCCCGAT TACTTTATTC TGGCTGGGCG GGGTAGAACC TAGCCAGTAT
CAAGCGAGTG TTGAGTCTGG CAATACCTTA CCTTCTTTGC ATTCTAGCCA GTTCGCGCCA
GATTATCCGT TAACCATTCG CACTGGCGTT AGGGCGATGA CACGCACCGC GATGGATTTA
TTTAATCAAC CAGCGCAATA A
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| Protein sequence | MTCLRVAYPL LALVFSASSL SVTASASDLD LSVSKALPKL EQLYLHLHQH PELSYQEKAT
SQRMAQELKQ LGFEVTSNFG GYGVVGIVKN GNGPVVMIRA DIDGLPIIEQ TGKEYASTVT
TLNADNSTVG IMHGCGHDIH MTSLIGTAQQ LMLHKADWQG TLMMVAQPAE EVGGGAKAML
KQGLFSQFPT PDSIIGLHVS ASIPAGKVGT VSGYALANVD SVDITIKGKG GHGAYPHVTI
DPVVLAARTV LALQTIVSRE VSPLEPNVVT VGSIHGGSKH NIISDEVKLQ LTLRSYNPKV
REQQIAAIKR ITTGIAISAG LPDDLMPVVY VHDDETIPST YNDPTLAAKV KASIEAELGS
DNVLVAPPVM AGEDFGLYGL TPQKRPITLF WLGGVEPSQY QASVESGNTL PSLHSSQFAP
DYPLTIRTGV RAMTRTAMDL FNQPAQ
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