Gene Sfri_3576 details

Gene Information

• Locus tag: Sfri_3576
• ID: 4280469
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 4246303
• End bp: 4246884
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638136388
• Product: hypothetical protein
• Protein accession: YP_752242
• Protein GI: 114564728
• COG category: [S] Function unknown
• COG ID: [COG3453] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR01244] conserved hypothetical protein TIGR01244

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATAT TGCAACGTTT TCGCCTACTG TCCACCAGCA TATTAATGTG TTGTTTCTTT 
TTTAGTGCGG GAGTGTTCAG TGCGGAGAGC ATGGCAAACA TTGATACCAG CAAGCTTGGC 
GACATAAAAG CAATTAAATT TAATAACCAG CAAGTCATTA CCGCGGGTTT ACCCACAGAG 
CCGCAATTTG CACAGCTCGC TCAGGCGGGT ATTAAAACCG TGATTAACCT CATTCCTAAT 
GATAATCCAA ACGCCTTAAT CAATGAGCAG CAAATCGTCA CTCAACTCGG TATGAATTAT 
CACAATGTTA GCGTGGACTG GCAGCAGCCT ACACAAGAAA ATCTACAGCA ATTTTTTAGC 
CTGATGGAGC AAAATGGCGA CGCACCAGTG CTAGTGCATT GCGCGGCTAA TTATCGTGCC 
TCAGCCTTTT ATTACTTATA CCAAGCCCGC CACAACAATG CGCCGTCAAT GGCTGAAGCA 
CTAACACCTT GGGGCGACTT ACAACAAAGC TTTGCTGAAT ATCCTCAATG GCAACAACTG 
ATAGAAGATG CAAAACAGCA ATATCAAACC AAACAACAGT AA 

 

Protein sequence

MNILQRFRLL STSILMCCFF FSAGVFSAES MANIDTSKLG DIKAIKFNNQ QVITAGLPTE 
PQFAQLAQAG IKTVINLIPN DNPNALINEQ QIVTQLGMNY HNVSVDWQQP TQENLQQFFS 
LMEQNGDAPV LVHCAANYRA SAFYYLYQAR HNNAPSMAEA LTPWGDLQQS FAEYPQWQQL 
IEDAKQQYQT KQQ