Gene Sfri_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3542 
Symbol 
ID4280435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4211837 
End bp4212370 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content39% 
IMG OID638136354 
Producthypothetical protein 
Protein accessionYP_752208 
Protein GI114564694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAGAA AAATTCTCGT TGTTGTCGCG ACTATTATTG CGATCCCTTT TGTTGTCGCC 
CTATTTGTTC AAAAAGACTA TTCAGTCACT CGTACTATCA CCATAGATAA ACCGATTTCC 
GAGGTTTTTA ATTACGTTAA ACATCTAAAA AACCAAGATA ATTTTAGTAA GTGGGCGCAA 
ATGGATCCCG ATATGGTCAA AACCTACCGC GGTACTGATG CGACAGTAGG CTTTGTGTCT 
GCTTGGGCCA GTGAAAACCC AGATGTTGGT GTTGGGGAGC AAGAAATTAT TGCCATAGAT 
GAAGGTAAAC GTATCGATTT TGAATTACGG TTTATCTCAC CCTTTGAAGC GACCGAGCCT 
GCCTATATGA GCACTGCAGC CGTTAATGCT AATCAAACTA AAGTTGATTG GGGTTTTAGT 
GGTCATTTTG CTTATCCAAC TAACTTAATG TTTTTGTTTA TCGATTTTGA AACCATGATA 
GGTGCTGATT TACAGCAAGG TCTAGAGTCA TTGAAAGTGG TACTCGAAAA ATAA
 
Protein sequence
MLRKILVVVA TIIAIPFVVA LFVQKDYSVT RTITIDKPIS EVFNYVKHLK NQDNFSKWAQ 
MDPDMVKTYR GTDATVGFVS AWASENPDVG VGEQEIIAID EGKRIDFELR FISPFEATEP 
AYMSTAAVNA NQTKVDWGFS GHFAYPTNLM FLFIDFETMI GADLQQGLES LKVVLEK