| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3537 |
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| Symbol | |
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| ID | 4280430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4206645 |
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| End bp | 4207616 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136349 |
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| Product | hypothetical protein |
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| Protein accession | YP_752203 |
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| Protein GI | 114564689 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACA TTCTATTTTC AGCGTTATTT TCAATGTTAT TCTCCAGCTT GATATTAATG
AGTGGCTGCA CGCCAGCAAG CCCTTCACAA GCATTAGGTA CCTTAGAGCG CGACCGAGTC
ATTCTTCGTT CAACCGCAGC AGAAATCATT ACTGCACAAC CCATTAAAAA AGGCATGCAA
GTCAACGCCG GTGACTTATT AGTCCAATTT GATACCCACA AACAAGCCGC GCGCTTAGCG
GTAATGCAAG CCGAAGTGGT TAAAGCCCAA GCCTACTTAT TAAAACTCAC TAATGGCGAG
CGCCCAGAAG ATATCGCCAG TGCCAATTCG GCATTAAAGA GTGCCAACGC CGCCAAAATC
GAAGCGCAAA AATCTTATCA ACGCAGCGCG AGTTTATTAG CAAAAAACCT GGTCAGTGAA
GCAGAGCGCG ATCGTGCTTT AGCGCTTCGC GATCAAGCCA ATGCAGAATA TGATGCCGCC
AACGATCGAT TAACAATATT GATCAAAGGT GTTCGCCAAG AAGATATTTT TCAAGCACAA
GCAGCACTCG ATGCTGCCAA TGCCAACCTA CGTTACGAGC AGCAGGTTTA CAGCGACTTA
AGCATTCGTG CAACTCGCAG TGGTAAGTTA GATAACTTGC CCTACAATGT TGGCGAACGC
GTCCAGCTAA GTGCGGTGGT AGCGGTTATC CAAGCTGATG CTGCGCCCTA CGCCAGAGTG
TATATACCAG AACCCTATGC AGCTAAACTT CGCATTGGCC AAACGTTGTC TGTCAGTGTA
GACGGTATCG ACAGCACATT TAACGGCACA CTGCGTTGGA TAAGTACTGA ACCGGCATTT
ACCCCCTACT ACGCACTGAA TCAAGCAGAT AGGTCACGAT TAGCCTTTCT AGCCGAAGTG
AGTTTAGACA GTTCGGCCAG CGAACTCCCT ACGGGCATAC CAGCCCAAGT TATATTACCG
ACACAAAAAT GA
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| Protein sequence | MKHILFSALF SMLFSSLILM SGCTPASPSQ ALGTLERDRV ILRSTAAEII TAQPIKKGMQ
VNAGDLLVQF DTHKQAARLA VMQAEVVKAQ AYLLKLTNGE RPEDIASANS ALKSANAAKI
EAQKSYQRSA SLLAKNLVSE AERDRALALR DQANAEYDAA NDRLTILIKG VRQEDIFQAQ
AALDAANANL RYEQQVYSDL SIRATRSGKL DNLPYNVGER VQLSAVVAVI QADAAPYARV
YIPEPYAAKL RIGQTLSVSV DGIDSTFNGT LRWISTEPAF TPYYALNQAD RSRLAFLAEV
SLDSSASELP TGIPAQVILP TQK
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