| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3504 |
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| Symbol | |
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| ID | 4280398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4173620 |
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| End bp | 4174642 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136317 |
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| Product | transcriptional regulator, LacI family protein |
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| Protein accession | YP_752171 |
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| Protein GI | 114564657 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0875897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATAACG ACAATAAAAT CACCCTAGCG GGTTTAGCCA AGCTTGCTGG TGTGTCTACT
TCTACCGTAT CAAGAGCACT CAACAATAAT CCGCTGATCA AACAAGAAAC TCGCGATAGC
CTCCAAGCGC TTGCCAAACA GCATAACTTT AGTTTAAACC GCGCCGCGAG TCGGTTACGT
ACACAAAAAA CCAATGTGAT TGCTGTCATT TTGAATCTAA GCGACAGTAC CGATCAAAGC
ATTAGCGATC CATTCTTACT TAAGGTTGTA GGTGACTTGA ACCAAGCACT CAACCAACAC
GGTTATGAAA TGTTGTTATC GAATTCATTA ATGGCTCATG AAGATTGGAC AAGTTACTTT
ATCAACAGTA GCCGTGCCGA TGGCATCATT GTTGTAGGCC AAGGAAAAAG CACCCAAAAA
ATAGAAGATG TCGCCCTCTC AGGAGCACCA CTGGTGGTGT GGGGAGATCC TAAAGTGAAT
GCTACCTATC CTGTTATTGG TAGCGATAAC TGCCTTGGGA GTTACTTAGC TACGCGTCAT
CTTATTGAAG GGGGCTGCAA ACGGATTGTA TTTCTTGGCG ACCCAGAACA TGCCGAAATG
AGTGAGCGTT ACAAAGGCTA CGAAAAAGCC CTCGCTGAAT TCAATCTTGA TATTAGTATC
GATCTTACAG TATCTTGCGA CATTACCAGT AAAGCTGCAT ACGAAAAAAT GGACCAAGTT
ATCCTTGATC ACGGGCTTTT TTTCGACGGT ATTGTAGCAG CCAGTGACAT GGTTGCTCTT
GGTGCATTAA AAGCGCTAAA AGAGCGTTAC ATCAATATTC CAAATGACGT CGGCATCGTA
GGATTTGATG ATATTGTCAT GGCTGAATTA TTTCACCCTT CACTCACAAC CATCCAACAA
GACACTAAAA CGGCCGCGAA TATCATGGTA GAACAACTCA TCAACCAATT GAATGGCCAA
CCAGCAAAAT CAGTTGTTAT GGACATCAAA CTGATCACTC GAAAATCGAC TAAATCGGTG
TAA
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| Protein sequence | MNNDNKITLA GLAKLAGVST STVSRALNNN PLIKQETRDS LQALAKQHNF SLNRAASRLR
TQKTNVIAVI LNLSDSTDQS ISDPFLLKVV GDLNQALNQH GYEMLLSNSL MAHEDWTSYF
INSSRADGII VVGQGKSTQK IEDVALSGAP LVVWGDPKVN ATYPVIGSDN CLGSYLATRH
LIEGGCKRIV FLGDPEHAEM SERYKGYEKA LAEFNLDISI DLTVSCDITS KAAYEKMDQV
ILDHGLFFDG IVAASDMVAL GALKALKERY INIPNDVGIV GFDDIVMAEL FHPSLTTIQQ
DTKTAANIMV EQLINQLNGQ PAKSVVMDIK LITRKSTKSV
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