| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3447 |
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| Symbol | |
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| ID | 4280344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4101371 |
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| End bp | 4102543 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638136263 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_752117 |
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| Protein GI | 114564603 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0678307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTCAT CAACACGTTC AATATACATA ATTTCATCAG TGGATTATTT TATGACAAAT
AGCTTAATGG TTCGGGATGT GGATACACAG CTTAAAAATA TTTACGATAC TTTTGAAAGA
GTTAACAGTG GTAATATCAA TGGCATTGGC CCTTGGTCTA CGCTGTATAA AGAAACATTC
TTGTGGGATA AATTTAGAGT TTTTGAATCA CATTGGATGT CATATGTATA TGACAGATCG
GTGACTTTTC CCGAAATACA CTCCATTCTC CAGATAATTA GACCTACCTT AGAGCAAGCA
TTAGATATCT CCGCTCCACC ATTGATTCAA GAAAAAATGT ATGAGCTAAG TAGGTTAGCG
TTAGAAATAA GATTATACGG AAAAACAGAA GATCGAGAAA AATACGTCAG AATGGCTGCA
CCATTAAAGT GTTTCCCTCC TACGTTACGC TACTACATTG AAGCCGTTGA AGCTCATGCG
AAATTTGCAG ACTATTTGCT ATATGGTAGT CCATCACCTA GAACGCTTGA AAGGATTTTG
AAGTTAGTTA TCGGTATCTC CAATTGTCCT AAAGGAGGAG TAAAATATTT AGAAAATTTT
CAAAGCCTCT GCTTAGATTA TACCCAACCA GATAATAAAG AAGCTTTGGA GATAATAAGA
CGTGATGAAG GGCAACATGT TGAGTTTAAA GCATGTTATC AGTCTTCTAA CACTAAACGT
CAGTATGATA AAAAGAATCT CAGCCAACAG CGAATTACAT CAGTTGTCGC ATTTTTGAAT
TCAAATGATG GAAATTTATT TATAGGTGTG GATGACGATA TGACTATACA TGGAATTGAA
GACGAGCTAA TGCAGTACCA TAGCGACTCA GAAGACAAAT TTGTAATGCA GCTCACATCT
CTTTTTCGGG ATAGTATTTA CACGCGTACC ACTGATAACC TTGAACTTAA AGCCCTAGCA
AAGCCTAAGG AGCTAATTAC GATTAGCTTA GTTTCGATTA ATGGTCATAC CGTTGCATGG
GTTCAGGTGA AACAATCAAG AGAACATTTA TTCTTTTATC GAGAAAGTAA AAGCAACTAT
CAATTTTTTA TCCGTACAGG GCGTAATAAG GAAAAAATAA AACCTGAGGA TATTGAGCGT
TATCTTGCTC TTCAAGATGG TATTTCAGTA TAA
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| Protein sequence | MSSSTRSIYI ISSVDYFMTN SLMVRDVDTQ LKNIYDTFER VNSGNINGIG PWSTLYKETF
LWDKFRVFES HWMSYVYDRS VTFPEIHSIL QIIRPTLEQA LDISAPPLIQ EKMYELSRLA
LEIRLYGKTE DREKYVRMAA PLKCFPPTLR YYIEAVEAHA KFADYLLYGS PSPRTLERIL
KLVIGISNCP KGGVKYLENF QSLCLDYTQP DNKEALEIIR RDEGQHVEFK ACYQSSNTKR
QYDKKNLSQQ RITSVVAFLN SNDGNLFIGV DDDMTIHGIE DELMQYHSDS EDKFVMQLTS
LFRDSIYTRT TDNLELKALA KPKELITISL VSINGHTVAW VQVKQSREHL FFYRESKSNY
QFFIRTGRNK EKIKPEDIER YLALQDGISV
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