| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3446 |
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| Symbol | |
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| ID | 4280343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4099854 |
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| End bp | 4100345 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638136262 |
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| Product | phage integrase family protein |
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| Protein accession | YP_752116 |
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| Protein GI | 114564602 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.993422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACCT TAATTTTTTA TCAAACTTTA ATATGGTCAT ACACAAGTGA CCTACTTCCT
CTGAGGGTTT GTGATATATC GTCACAAGAA CGAATGTTTG CAAGAGTTAA GCTTATTCAG
CAGAAAACGG ATGTTGAAGT CCAGTTTGAA GTCACTGCTA GAACTCAACA AAGTCTGATG
AAATGGATTT TTGTCGCAGC TCTAAAGACA AGTGATTATT TATTTCCAAG CTTAATACGA
AATGAGCAAC CGATTAGCTA TTCGTATTAT CGTTCTCTTG TCAGGTCGTG GGCATCAAAT
ATTGGTCTAG ATCCTAACTT GTATGGGACT CACTCAATGA GACGAACCAA AGCAACATTA
GTCTATGCAA AAACTAAGGA TATTCGAGCC GTCCAACTTT TACTCGGACA TACTAGAGTA
GACAACACAA TTCGTTATCT TGGTGTTGAA TTGGAGGATG CTCTTACACT TTCAGAATCT
ACTGATTGTT AA
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| Protein sequence | MKTLIFYQTL IWSYTSDLLP LRVCDISSQE RMFARVKLIQ QKTDVEVQFE VTARTQQSLM
KWIFVAALKT SDYLFPSLIR NEQPISYSYY RSLVRSWASN IGLDPNLYGT HSMRRTKATL
VYAKTKDIRA VQLLLGHTRV DNTIRYLGVE LEDALTLSES TDC
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