Gene Sfri_3426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3426 
Symbol 
ID4280326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4078819 
End bp4079658 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content48% 
IMG OID638136245 
Productcarboxylesterase 
Protein accessionYP_752099 
Protein GI114564585 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAATTG AAAATATGAG TGTAAATAAG AGTTTTGGTG GTTGGCATAA ACAGTATAGT 
CATCAATCTC AAACGTTAAA TTGTGAGATG CGATTTGCTA TCTATCTGCC ACCACAAGCA
TCAAGTGGTA AGAAGGTCCC AGTTCTGTAC TGGCTTTCAG GTTTGACTTG TACCGATGAA
AACTTTATGC AGAAAGCTGG GGCACAAGCA CTGGCTGCAG AGCTTGGTAT TGCTATCGTC
GCGCCGGACA CCAGCCCCAG AGGCGAGAAT GTCGCCGATG ATGAAGGCTA CGATCTTGGT
AAAGGCGCGG GCTTTTATGT CAATGCGACG CAGGCACCGT GGAATCGCCA TTACCGTATG
TACGATTACG TCGTCGATGA ACTGCCAAAA CTGATTGAAT CTATGTTCCC TGTCAGTGAT
AAACGTTCTA TTGCGGGCCA CTCAATGGGC GGGCATGGTG CGTTAGTTAT CGCGCTGCGT
AACGCTGATG CATACCAGTC AGTATCGGCC TTTAGCCCGA TCAGTAACCC GATTAATTGT
CCTTGGGGCA AGAAGGCGTT GACTGCCTAT TTAGGCCGCG ATTCGGCGAC ATGGATGGAA
TATGATGCCA GCGTCTTGAT GCGCCAGGCG ACCCAATTTG TACCGGCTCT GGTAGACCAA
GGTGACGCCG ATAACTTTCT TGTCGAGCAG TTGAAGCCCG AAGTGCTCGA AGCTGCAGCT
AAGGTTAAGG GTTACCCTCT AGAGCTTAAT TATCGTGAAG GTTATGATCA TAGCTACTAT
TTCATCTCCA GCTTTATCGA AAACCATCTG CGTTTTCATG CCGAGCATCT GGGAAAGTAA
 
Protein sequence
MTIENMSVNK SFGGWHKQYS HQSQTLNCEM RFAIYLPPQA SSGKKVPVLY WLSGLTCTDE 
NFMQKAGAQA LAAELGIAIV APDTSPRGEN VADDEGYDLG KGAGFYVNAT QAPWNRHYRM
YDYVVDELPK LIESMFPVSD KRSIAGHSMG GHGALVIALR NADAYQSVSA FSPISNPINC
PWGKKALTAY LGRDSATWME YDASVLMRQA TQFVPALVDQ GDADNFLVEQ LKPEVLEAAA
KVKGYPLELN YREGYDHSYY FISSFIENHL RFHAEHLGK