Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3426 |
Symbol | |
ID | 4280326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4078819 |
End bp | 4079658 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638136245 |
Product | carboxylesterase |
Protein accession | YP_752099 |
Protein GI | 114564585 |
COG category | [R] General function prediction only |
COG ID | [COG0627] Predicted esterase |
TIGRFAM ID | [TIGR02821] S-formylglutathione hydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACAATTG AAAATATGAG TGTAAATAAG AGTTTTGGTG GTTGGCATAA ACAGTATAGT CATCAATCTC AAACGTTAAA TTGTGAGATG CGATTTGCTA TCTATCTGCC ACCACAAGCA TCAAGTGGTA AGAAGGTCCC AGTTCTGTAC TGGCTTTCAG GTTTGACTTG TACCGATGAA AACTTTATGC AGAAAGCTGG GGCACAAGCA CTGGCTGCAG AGCTTGGTAT TGCTATCGTC GCGCCGGACA CCAGCCCCAG AGGCGAGAAT GTCGCCGATG ATGAAGGCTA CGATCTTGGT AAAGGCGCGG GCTTTTATGT CAATGCGACG CAGGCACCGT GGAATCGCCA TTACCGTATG TACGATTACG TCGTCGATGA ACTGCCAAAA CTGATTGAAT CTATGTTCCC TGTCAGTGAT AAACGTTCTA TTGCGGGCCA CTCAATGGGC GGGCATGGTG CGTTAGTTAT CGCGCTGCGT AACGCTGATG CATACCAGTC AGTATCGGCC TTTAGCCCGA TCAGTAACCC GATTAATTGT CCTTGGGGCA AGAAGGCGTT GACTGCCTAT TTAGGCCGCG ATTCGGCGAC ATGGATGGAA TATGATGCCA GCGTCTTGAT GCGCCAGGCG ACCCAATTTG TACCGGCTCT GGTAGACCAA GGTGACGCCG ATAACTTTCT TGTCGAGCAG TTGAAGCCCG AAGTGCTCGA AGCTGCAGCT AAGGTTAAGG GTTACCCTCT AGAGCTTAAT TATCGTGAAG GTTATGATCA TAGCTACTAT TTCATCTCCA GCTTTATCGA AAACCATCTG CGTTTTCATG CCGAGCATCT GGGAAAGTAA
|
Protein sequence | MTIENMSVNK SFGGWHKQYS HQSQTLNCEM RFAIYLPPQA SSGKKVPVLY WLSGLTCTDE NFMQKAGAQA LAAELGIAIV APDTSPRGEN VADDEGYDLG KGAGFYVNAT QAPWNRHYRM YDYVVDELPK LIESMFPVSD KRSIAGHSMG GHGALVIALR NADAYQSVSA FSPISNPINC PWGKKALTAY LGRDSATWME YDASVLMRQA TQFVPALVDQ GDADNFLVEQ LKPEVLEAAA KVKGYPLELN YREGYDHSYY FISSFIENHL RFHAEHLGK
|
| |