Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3420 |
Symbol | |
ID | 4280322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4076084 |
End bp | 4076290 |
Gene Length | 207 bp |
Protein Length | 68 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638136241 |
Product | transcriptional regulator, XRE family protein |
Protein accession | YP_752095 |
Protein GI | 114564581 |
COG category | [K] Transcription |
COG ID | [COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGACT TAGCTATCCA ATTTGGAGCA AAATTGCGCG ATAAGCGCAA AACACTAGGC ATTTCTCAGG ATAAATTGGC ATTACTAGCA GAGATTGACC GCAGTTATGC AGGACGAATC GAGCGCGGTG AAGTCAATAT CACCCTCGAA AAAGCCTATC AGTTAGCAGA GGTTTTGGGG TGTGATGTCA GGGAACTGCT GCCTTAG
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Protein sequence | MKDLAIQFGA KLRDKRKTLG ISQDKLALLA EIDRSYAGRI ERGEVNITLE KAYQLAEVLG CDVRELLP
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