Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3418 |
Symbol | |
ID | 4280320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4074001 |
End bp | 4075410 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638136239 |
Product | type III restriction enzyme, res subunit |
Protein accession | YP_752093 |
Protein GI | 114564579 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.280626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCTAA GACAATGGCA ATCAGAGTGC GTCAATCGCG CTCTAGAGCA CTTTAGTGCC AAACATAAAC ACTTCCTTTG TTTGGCAACT CCAGGCGCTG GTAAAACGAT TATGGCTTCA GAAGTCGCTG TTCAGCTGCT TGAGCAAGAC CTTATCGATT TTGTACTTTG CTTTTCACCT TCGATAAATA TATCGCAGGG TATCAAGCAA ACTTTCTCGA AACGGCTGGA ATGTCGTTTC GATGGCGTCA TAGGTGCCGT TGGTTGCTCT TATACATATC AAAGCATGCT GTCTTTCAAA GAGGATTTCT GGCAACTGTT AAAACAAAAT CGGGTACTCG TGATATTTGA CGAGATCCAC CATTGCTCAG GCAGCTCTCT TGAAGATGCT AACGCCTGGG GGGAAGAGAT CTTATTGAAT ATTCAAAGCC AAGCCGAATA CACTTTAGCG TTAACTGGCA CTCCGTGGCG CTCAGATCAA GCACCGATAG CTTTATCTCG TTATACAGAC CCAGACAATC AGATACAGTG TGATTATATC TACGGTTTAA GGGAAGCTGT TGCTGATGGT GTATGCCGAA GCCCAAAGAT TGTATTGATC GATAATGAAA AAATTTCTGT TACTGACGAA GAAAATGAAA CTAAGACGTT TAATTGCCTG GATGCTCTAT TCAAAGGCTC ATTAGTTTCT TACCAATCGG TCATCAAAAA TGATGTTGCC ATTAGACATG CCTTAACGCT GGCGACTAAC AAGCTCGACG ACATAAGACT GCACAACCCT AATGCTGCTG GACTAGTAGT TGCATCATCG ATAGAGCATG CTGCATACAT TCTGAATATG CTCAGAAATG AATATGCACA AACCGCTGAA ATAGTTACTT ATAAAGAAGA CCTGCCTTCA CTTAAAATCA ACGAATTCAG GAATAGCACA ACGAACTGGA TAGTCAGTGT AGGCATGATT AGCGAGGGCA CCGACATTCC ACGTTTGCAG GTGTGTTGTC ACCTTAGCAG GGTTAAAACC GAACTCTACT TCAGGCAAGT ATTAGGCAGA ATTTTAAGAG TCGACAAGGC TACGAACCAA GATGCTTGGC TGTACACCTT TGCAGCACCA AAGCTTGTCG AGTTTGCAAA TCGTATAGCT GAAGAGATTC CAGATGTGCC AGTTGTATTC AGGGAGTCTG ATACTGTTAC GGTCTCCGTT AAGCTGGGGG GAAGTGAAAT AATAAGAGCA AGTTCCCCAT CTCAAGATAG TCATACAGTT AGGTTTAGTA CTCCACACAT AACAGCACCA AAACACCCGT TAATAGCCGG TTCGAACAAT CAAAATCTAT CTTGGCCGAC GTCACCATCT TTTGAGATTC TAGGTGGCTT TAGAGAAAAG GTAGTATCTA CTTTTAACTC CCCTTTTTGA
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Protein sequence | MHLRQWQSEC VNRALEHFSA KHKHFLCLAT PGAGKTIMAS EVAVQLLEQD LIDFVLCFSP SINISQGIKQ TFSKRLECRF DGVIGAVGCS YTYQSMLSFK EDFWQLLKQN RVLVIFDEIH HCSGSSLEDA NAWGEEILLN IQSQAEYTLA LTGTPWRSDQ APIALSRYTD PDNQIQCDYI YGLREAVADG VCRSPKIVLI DNEKISVTDE ENETKTFNCL DALFKGSLVS YQSVIKNDVA IRHALTLATN KLDDIRLHNP NAAGLVVASS IEHAAYILNM LRNEYAQTAE IVTYKEDLPS LKINEFRNST TNWIVSVGMI SEGTDIPRLQ VCCHLSRVKT ELYFRQVLGR ILRVDKATNQ DAWLYTFAAP KLVEFANRIA EEIPDVPVVF RESDTVTVSV KLGGSEIIRA SSPSQDSHTV RFSTPHITAP KHPLIAGSNN QNLSWPTSPS FEILGGFREK VVSTFNSPF
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