| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3412 |
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| Symbol | |
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| ID | 4280314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4061695 |
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| End bp | 4063863 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638136233 |
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| Product | NERD domain-containing protein |
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| Protein accession | YP_752087 |
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| Protein GI | 114564573 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATAA GAAAAGAACA AGACATTTTC GATGAGCTAG AGCACTTATC GTCCAAGGAA
GGGTTTATCG ATGTTTTATC ATTCTTATGC TGGAAAGATA CATTCGTCCA CGGGAGAAAT
GGCATCATAG ATGAAGATGC CTTTGCCAAT AATTTTGATC GTTCTAAATT ATGCCGCACC
GAGCTAGCCA CACTATATGG TTTGATGTGT AAAACTGGAG TTACTGGTAA TGGCCTAACA
ATCAATGAAA TAGTTGAATA CGCCCAACGG GTCTATGAGT TATTCGAAGA GTTACATCGG
TCATTCTACA ATGCAGAGGA CTTTGAGGAA ACGACTGAAA AGCTAGAATC ATTTAAGAAT
TTAGCAAACG GTTCCTCGTT TATGAGAGAA GCTATATTTT ATAGTGGAGA GAGCGTTTTT
AAACATCAGT ATCGTGATTT AGTAAAAATT AGATACCAAA AAGACAACCC ATGGCTCAAG
GAGAATAAAG GGTTCGTAAT TGAAGATGCC ATATCCGTTT TAGAAGTAAT AGATAAGCTT
CAATTGGAAA AGCTAAACAC CTTAGTTCCT AATATTTTTC AAAAGGACAA TCAAGCTCCC
TTTTCATCAG CCTTTTGCTT TAGCGCTGAT GAACTCCATA GGCATTCAGA GCTTAGCAAA
GAAGTCACTT TCAATGTTCT TTCTGCACTG TCTGCGTCGC CAACTAGTGG TATGAATGGG
TTCTCAAGCG TTGATGATTT CAATCATAGA AACGCCTTTC CAATCGTAAA GTTAGATGAT
GGTTTATATG CTTCATTTTT ATCATTTTCT AATTGGGAGT CTCTATATGA AAGCCCCTTC
TTTTGGTTTA ATACCGATAG TAGCTATAAG GGTACTGCAA GCGATCACAG AGGAGAATTC
ACAGAAGATT TTACCGCTGA CCGTCTAAGA AAAGTGTTCC CGCCTCAAAA TGTATACACC
AATATTGATA TATACGATGG GAAAAACAGA GCGGGTGAAA TAGATGTTCT GGTAGTCCAT
GGTAAATATG CAATCGTGAT ACAAGCGAAA TCAAAGAAGC TTACTATTCC AGCCCGCAAA
GGAAACTCAA AACAACTTAA GTCCGATTTC AAAGCCGCTG TTCAAGATGC TTATGACCAA
AGCTACCTTT GTGCAGAGCT GTTACAAAGG AAAGATGTTA AGTTTAAAGA CGCAGAAGGA
AAGGTTGTTG CTTTGGGTGA TGACTACGAA TCGATTTTCC CTGTATGTAT TGTTTCCGAC
CATTACCCAG CTCTAGCCTC CCAAGCTCAA CACTTCTTGA GGCATACCGT AACGGAAACT
ATCAAGCATC CATACGTAAT GGATGTGTTT TTGATAGATA TGATGACAGA AATGTTAAGC
TCACCATTGT ATTTTTTAGA TTTCGTTACC AAGAGAAGTG ACCATGGTGA TTCAATTCAT
TCTAATCATG AATTAACAAC ACTCTCCTGC TATATCATTC AAAACCTATT TTTTGACGAA
AACCCAGACA TGGTAATACT TGATGATGAC GTCTCTGCAT CACTAGAATT ATCGATGTTA
GCGAGGCGTG AAGATGGTTT TGATCATATC CCTAAAACGC CAAGAGGAAT TCTTACAAAT
TATTCTGGAA CCCTCATTGG TAACATTCTT GATGATATCA AAAACTCTTG TGACCTTGGC
CTCATGAAAT TAGGATTCCA CATTCTGTCA CTCAGTGAAG GCTCTGGAAA CATCATTAAT
GATGCTATTT CGCAAATGGT TGATCTACAC AAAAAGGACA ACAAACATCA TGACGCGACC
TTACCAATAC TGGAAGCAAA AAAAGGCTTA ACAATCCATG TCAACAATGA TGAGGATGAG
GTCTCTGGTA AACGTCTAGT AGCACACTGT GAGAAAAGAA AGTACACATG TAAAGCAGAT
GAGTGGGTAG GTTTATGCTT TAGTCCCGTG TCATCAAAAT TTAGGTTTGC TACCTATCAT
TGCTCAAAAT GGGAACCTTC CGTCAAGATG GATAAAATAG TAGAGAGCCT ACCTAAGATA
AGTGATGCAC ATGAAGTAAA AAATGGGAAA GTCGACTTTA AAGCTAAGCA GGCCGTTAGG
AAAAAAATAG GGCGTAACTC ATCATGTCCC TGTGGTAGTG GTAAAAAATT TAAACGATGC
TGTATTTAA
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| Protein sequence | MTIRKEQDIF DELEHLSSKE GFIDVLSFLC WKDTFVHGRN GIIDEDAFAN NFDRSKLCRT
ELATLYGLMC KTGVTGNGLT INEIVEYAQR VYELFEELHR SFYNAEDFEE TTEKLESFKN
LANGSSFMRE AIFYSGESVF KHQYRDLVKI RYQKDNPWLK ENKGFVIEDA ISVLEVIDKL
QLEKLNTLVP NIFQKDNQAP FSSAFCFSAD ELHRHSELSK EVTFNVLSAL SASPTSGMNG
FSSVDDFNHR NAFPIVKLDD GLYASFLSFS NWESLYESPF FWFNTDSSYK GTASDHRGEF
TEDFTADRLR KVFPPQNVYT NIDIYDGKNR AGEIDVLVVH GKYAIVIQAK SKKLTIPARK
GNSKQLKSDF KAAVQDAYDQ SYLCAELLQR KDVKFKDAEG KVVALGDDYE SIFPVCIVSD
HYPALASQAQ HFLRHTVTET IKHPYVMDVF LIDMMTEMLS SPLYFLDFVT KRSDHGDSIH
SNHELTTLSC YIIQNLFFDE NPDMVILDDD VSASLELSML ARREDGFDHI PKTPRGILTN
YSGTLIGNIL DDIKNSCDLG LMKLGFHILS LSEGSGNIIN DAISQMVDLH KKDNKHHDAT
LPILEAKKGL TIHVNNDEDE VSGKRLVAHC EKRKYTCKAD EWVGLCFSPV SSKFRFATYH
CSKWEPSVKM DKIVESLPKI SDAHEVKNGK VDFKAKQAVR KKIGRNSSCP CGSGKKFKRC
CI
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