| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3286 |
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| Symbol | |
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| ID | 4280188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3930762 |
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| End bp | 3932351 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136104 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_751961 |
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| Protein GI | 114564447 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCATTA TTGATCCTAT TATTACCGGA TTAAGTTCAG GCTGGCATCA TATCGATGCT
AGTACCTTAG AAATGGATCG TCACTTTGAC GCTGATGTTG TTATTGTTGG TACCGGAGCG
GGCGGTGGCA CCGCAGCAGA AATACTCACT GAAGCTGGAT TGAAAGTGAT TATGATTGAA
GGCGGCTCGC TTAAATCATC AACTCACTTT GATATGGAAG AGCGCCACGC TTATCCGAAT
TTGTACCAAC AAGCTGCTGC AATGAAAACT GCTGATAAAG GTATTGGTAT ATTTCAAGGT
CGAACGGTAG GCGGTTCAAC CACGGTCAAT TGGACTACTT CAATTAGAAC CCCCGAGCAA
ACCTTGGCCT TTTGGGAGCA AGAAAAGTCA GTAAAAGGCC TGTCTTCGCA AGATTTACTG
CCTTGGTTTG AGTTAATGGA ACAGCGGCTC AATATTGAAC AGTGGCAGTT TGAACCCAAT
AGAAATAATG GTGCATTGCG CGAAGGTTGT GAAAAGCTGG GTTGGGATTA CACCGTTATT
AAACGTAATG TTAAAGGTTG CTGGAATACC GGTTATTGTG GCATGGGTTG CCCCGTAAAC
GCCAAGCAAT CAATGCTAGT GACCACCATA CCTGCTGCCT TAGACAAAGG CGCAACGCTG
ATTTCTCGCG CTAAGGTGAT CAAACTTGAA CACAAAGGCG ATCAAGTTGT TGGTTTAACG
GCCCAGGCAT TAACCGAAGG GCTAAAGCCA ACATCAGTGA ACATTACCTT TAGTGCTAAA
CATTATATTT TAAGTGCGGG TGCAGTTCAT ACACCAACGA TATTAATGCG TTCTAACACC
CCAGATCCAC ATAAACAATT AGGTAAAACG TTTTTACATC CGTCATTGTT ATCGGGCGGT
ATTTTTGCAG AACAAATTAA TGGTCACAGT GGTGCGCCGC AATCTATCTA TTCAGATGAA
TTTGTTTGGC GTGATGGCGC GTCTGGTGAT CTAGGTTATA AGCTTGAAGT TGCGCCTGTA
CATCCCGTGT TGATTGCATC TAAAACCATT GGTTATGGTG TGAGCCACGC ACAATTAATG
GCTAATTTTA ACCAAATGCA GGTGACTATT GCGCTTATTC GTGATGGTTT CAATCAGCAA
TGTCCTGGTG GTCAGGTAAG ATTAACCGAT ACTAGTTTGG CGTTAGATTA TCCTTTAGAT
AAAGGTTTTT GGGACGGTGC TCGTAGGGCA TTTTTGTCGA TGGCCGAATT ACAATTTGCT
GCAGGTGCCA AAAAGGTGTT GCCGATGCAT GATGGCTTGG CTTTTCTTAA TTCGTGGAGT
GAAGCAAAGC AGGCTATTAA TAATGCCGAT TTAGGTTTAT TAAAAACCAT TGTCGCGTCG
GCCCATGTGA TGGGCGGTTG TGCAATGGGT GAAGATAAAA CCCTTTCAAT GGTCGATGGT
TTTGGTAATT CGCATTACCT TGAAAATTTA TCGGTGATGG ATGGTTCGGT ATTCCCAACC
AGTTTAGGCG CGAATCCGCA GTTGTCTATT TATGGTATTG TGGCTCGAAA TGCAACGGCA
TTAGCACAAA AATTGACTCA AACTGGCTAG
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| Protein sequence | MAIIDPIITG LSSGWHHIDA STLEMDRHFD ADVVIVGTGA GGGTAAEILT EAGLKVIMIE
GGSLKSSTHF DMEERHAYPN LYQQAAAMKT ADKGIGIFQG RTVGGSTTVN WTTSIRTPEQ
TLAFWEQEKS VKGLSSQDLL PWFELMEQRL NIEQWQFEPN RNNGALREGC EKLGWDYTVI
KRNVKGCWNT GYCGMGCPVN AKQSMLVTTI PAALDKGATL ISRAKVIKLE HKGDQVVGLT
AQALTEGLKP TSVNITFSAK HYILSAGAVH TPTILMRSNT PDPHKQLGKT FLHPSLLSGG
IFAEQINGHS GAPQSIYSDE FVWRDGASGD LGYKLEVAPV HPVLIASKTI GYGVSHAQLM
ANFNQMQVTI ALIRDGFNQQ CPGGQVRLTD TSLALDYPLD KGFWDGARRA FLSMAELQFA
AGAKKVLPMH DGLAFLNSWS EAKQAINNAD LGLLKTIVAS AHVMGGCAMG EDKTLSMVDG
FGNSHYLENL SVMDGSVFPT SLGANPQLSI YGIVARNATA LAQKLTQTG
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