| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3239 |
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| Symbol | |
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| ID | 4280141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3876700 |
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| End bp | 3877668 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136057 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_751914 |
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| Protein GI | 114564400 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000819869 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATACGCG TTCCAATGCT GTTTTTTTGG CCAACTTTAG TCTTAGTAAG CCTATTATCT
GCATGCCAAC CAACAGCAAC TAAAGTTCAG GTCATCACTA CCGATGCCAG TTACAGTGCA
AGTCTGTCAA ATGATGCAAC CATTGCCTTG GTTAGCACGG CTCATAATGG CGTACAGGTA
TGGGATCTTA CTGACTCAAC GTTGTCTTAC CAATGGCTCC AAGGCCAACA ACAAAATACC
AGTAACGTCA TTGATACCGC CATATCAGCT AATAATCTGT ATGCAGCAAC CATTAGCAGC
CACTCACTTG CGATATGGCG ATTAACCGAT GGTTCATCTG TTGGATGGTG GTCTTTGCCT
TCTTATGCGC AAAGTGTCGC AATTGCTAAT ACAGGGCAAA CCCTTGTTGG CTTAGTCGAT
GGATCTGTGA TGTCATTGTC ACCTGAAAAA TCACGCTTAA TTCAGTTTTT AGGCCATCAT
GAAAAAGTGA ATAGTGTGTC CATTAGTGCC GATGGCAACA CCGCATTGAG CGGCGGTAAT
GATGGTAAAG TATTACTTTG GCAAGCCCAA ACCGGTCAAC CATTACAACA ATGGCAGCTA
GCGTCCCGCA TCACTAAAGT GGCGATTAAC GATTCAGCGA CTCTCAGTTT TGCAAGCGAT
ATCACCGGAA ATGCCACCCT GTGGCAGTCG GATACAGGTA ATCCAATAAG TCATCTCGAT
ATTAATCGAC GCCAAATGAA TTTTTCAAGT GCTCGCTTTG TGGATAATGA CCAGCAATTG
CTCACAGGTA CCCCATCAAG AGAAATATTT TTATGGCAAA TAGACACCGG TAAACGACTT
TCTCGCTGGG AAGTTCAATT GAGTAAAAAC ACCCAAAACA AAGGCGCTGT AGTATACTCT
GCCGCAATGA TAGCGCCTGG CTCAATCGTC AGTATTAGCA GCCAAGGTTT AGTTGAATAT
TGGCAGTAA
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| Protein sequence | MIRVPMLFFW PTLVLVSLLS ACQPTATKVQ VITTDASYSA SLSNDATIAL VSTAHNGVQV
WDLTDSTLSY QWLQGQQQNT SNVIDTAISA NNLYAATISS HSLAIWRLTD GSSVGWWSLP
SYAQSVAIAN TGQTLVGLVD GSVMSLSPEK SRLIQFLGHH EKVNSVSISA DGNTALSGGN
DGKVLLWQAQ TGQPLQQWQL ASRITKVAIN DSATLSFASD ITGNATLWQS DTGNPISHLD
INRRQMNFSS ARFVDNDQQL LTGTPSREIF LWQIDTGKRL SRWEVQLSKN TQNKGAVVYS
AAMIAPGSIV SISSQGLVEY WQ
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