Gene Sfri_3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3229 
Symbol 
ID4280131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3866987 
End bp3867631 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content36% 
IMG OID638136047 
Producthypothetical protein 
Protein accessionYP_751904 
Protein GI114564390 
COG category[S] Function unknown 
COG ID[COG5395] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.892596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTAT TTAAAAAGTG TGGATACGGT ATTTTCTATG CCTTAGCTCT TGGTGTTAGC 
ATTTATGCCA TTCTGTTTGT AACCGTTGAT TGGGTTGGCT CAGAATATTT AAAAGAAAAG 
TTTTCATTAA CACCATTGGC GATGTATCTA CATATGGTCG GAGGCTCAAT AGCGTTAACC 
ATTGGCGCAT TTCAGTTAAA TAGTCGCATG AGAGCGAAAA GTATCAAACT TCATCGAACG 
CTTGGTAAAG TCTACGTTAC CGCCGTATTA CTCTCCGGTT CTGCTGGTTT ATACTTAGCT 
ACCAATTCTA TGGGTGGTAT TGTTGCTCAT TTCGGTTTTG GTACTATGGC TTTTTTATGG 
CTTTTTACTG TAAGCATAGC ATTTGTTCAA ATAAAAAAAG GTAACGTGAA TGCACATCGC 
TATTGGATGA TAATAAACTA CTCTTTAACT TGTTCAGCAA TTACCCTTAG ATTGTATCTA 
CCATCATTTC CATGGTTATT TAATGTCGAC TTTATAACGT CTTACATTGC AATTTCTTGG 
GTTGCCTGGG TTCCAAATGT ATTAGTAGCA CAATTATATT TACTAAAAAC CAAACGTGTT 
AGTTATTCAG TTCAACGTAC TATTGATAAT ACATTGAGTA CATAG
 
Protein sequence
MEVFKKCGYG IFYALALGVS IYAILFVTVD WVGSEYLKEK FSLTPLAMYL HMVGGSIALT 
IGAFQLNSRM RAKSIKLHRT LGKVYVTAVL LSGSAGLYLA TNSMGGIVAH FGFGTMAFLW 
LFTVSIAFVQ IKKGNVNAHR YWMIINYSLT CSAITLRLYL PSFPWLFNVD FITSYIAISW 
VAWVPNVLVA QLYLLKTKRV SYSVQRTIDN TLST