Gene Sfri_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3178 
Symbol 
ID4280080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3805199 
End bp3805720 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content45% 
IMG OID638135996 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_751853 
Protein GI114564339 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAA ATCAGCAAGC AAATGCAACC AAAGACAACT TGCAGGCACC CTTGATTAGA 
ACATTACAAG CACATGACGA TGCCGCATTA GCAGCGGTTA TTCGTGAAGT GTCTGCAGAA
TATGGGTTAA CCCCAGATAA AGGCTTTAGC GTAGCCGATA AAACCCTCGA CTGTTTAAGT
GAGGTGTATC AAGCTGAAGG TTCACAATAC TGGGTGATTG AGTATCAAGG CAAAGTGGTT
GGCGGCGCTG GAATTGCGCC ATTAGCAAAA AATGACGGCG TATGTGAATT ACAAAAAATG
TATTTTTCTC GCGCTATACG TGGTCAAGGT ATGGCGAAGC CATTAACCCG TCAGTGTATT
GAGTTCGCCA AGCAACAAGG CTATCAATCA ATGTATTTAG AAACCACGGC AGTGCTAGTT
GAAGCACTAG CACTCTATGA AAAACTGGGC TTTAGTCACT GTCAGCATTT AGGCGAAACC
GGCCACGATG CCTGTGAAAT CGCGATGATA AAAGCGCTGT AG
 
Protein sequence
MTENQQANAT KDNLQAPLIR TLQAHDDAAL AAVIREVSAE YGLTPDKGFS VADKTLDCLS 
EVYQAEGSQY WVIEYQGKVV GGAGIAPLAK NDGVCELQKM YFSRAIRGQG MAKPLTRQCI
EFAKQQGYQS MYLETTAVLV EALALYEKLG FSHCQHLGET GHDACEIAMI KAL