| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3161 |
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| Symbol | |
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| ID | 4280063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3785348 |
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| End bp | 3786106 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135979 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_751836 |
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| Protein GI | 114564322 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATCTGA GCTTAAATAA AGAGAGCATT ATGGAACGTA CAATACTGAT CACTGGCGTA
GGTAAACGCA TAGGTTATGC ACTGGCCAAA TATTATTTGG CTCAAGGTCA TCATGTCATT
GGCACTTATC GCACTCATTA TGACAGCATT GAACAGCTCG GTAAGTTGGG CGCGAGTTTA
CATTCATGCG ACTTAACCGA TCCAGCATCT ATTGATGGAT TAATTATTCA CATCAATGAG
CATCATGCTC GCGTCGATAC CATTATTCAT AATGCGTCAG ACTGGTTACC CGATAACAGC
GGCTTAAGCC CTGCCGATAC GATGATGCGG ATGATGCAAA TTCACGTATC AGCACCGTAT
CAAATCAATC TCGCCTTAGC GCCATTACTG ATTAGCGCCG CTAAAAGCAA TGACGACAGT
ATTGGTGCCA GTAACATTAT TCACATTACC GATTACGTTG CCGAAAAGGG CAGTAAAAAG
CACATCGCCT ACGCCGCCAG TAAAGCAGCA TTGCATAATA TGACACTGTC ATTTGCCAGT
TTATTAGCCC CACATGTCAA AGTGAACTCC ATTGCTCCTG CGATGATTTT ATTTAATGAA
GATGACGGCG AGACATACAA AGCCAAGGCA TTGGCTAAAG CCATATTGCC CAAAGAAGCT
GGTAATGCGG AGATTATTGT TTTAGTCGAC TACTTGCACA CCAGCCATTA TGTTACCGGC
CGCAGCTACG CCGTTGATGG CGGCAGGCAT TTAAAATAA
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| Protein sequence | MYLSLNKESI MERTILITGV GKRIGYALAK YYLAQGHHVI GTYRTHYDSI EQLGKLGASL
HSCDLTDPAS IDGLIIHINE HHARVDTIIH NASDWLPDNS GLSPADTMMR MMQIHVSAPY
QINLALAPLL ISAAKSNDDS IGASNIIHIT DYVAEKGSKK HIAYAASKAA LHNMTLSFAS
LLAPHVKVNS IAPAMILFNE DDGETYKAKA LAKAILPKEA GNAEIIVLVD YLHTSHYVTG
RSYAVDGGRH LK
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