| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3116 |
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| Symbol | |
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| ID | 4280019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3727802 |
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| End bp | 3728605 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135935 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_751792 |
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| Protein GI | 114564278 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0569329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAT ATTTCACTTT GATTGCTGCA TTACTGGTTT TACCATCAAG TTATGCCGAA
ATTCCAAGCA CTGTTAACAC ACAAGCTGAT ACTTTTACCT GGCCTGGCGG AGGCTCGTTA
GCGGTTAGCT TGTCTTATGA TGATGCGCTT AATAGTCAGT TAGATAATGT GATTCCTGCG
CTTGATAAAC ATAATTTCAA GGCGTCATTT TATGTGGTAG TAAACTCTCC GGTTATGAAT
GCGAGGTTAG ATGAATGGCG TGCAGCAGCT AACAATGGCC ATGAGCTTGG CAATCACAGT
GTTTATCATC CTTGTCGAGC GTCATTACCG AACAAAGATT GGGTTAAGGC ACATCATAAT
CTTGATCATT ACAGCGTGGC ACAGATGATT GAAGAACTTG AAGTAGCCAA TACTTTCTTA
AAGGCCATTG ATGGTCAATC GGAACGCACT TATACGCTGC CTTGTGGCGA TATGGTGATT
GGCGCTGATG TGTCGAGTCG TCAACAATAC CTGAGCCAAC TCAATGAGTT ATTTACTGCG
GTGAAAGGAG AGGGAGATGA TGCTCGATTT TCACTGATAT TGTATCCCGA AGGCCAAAGT
GGCAAGGAGC TTATCAATTA TATTCGTAAT ATTCCTGCAG ACACTTTACT GGTAAACATA
ATATTTCATG GGGTTGGAGG AGATTATTTA TCGGTGTCAT CTGAAGCGCA CTCTGAGCTA
TTAACGTTCT TAGCCAGTAA CCGGGATGCT TATTATGTTG ATTCATATAT CAACTTGATG
AAATATGCCG ACAGTAAGCT GTAA
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| Protein sequence | MIKYFTLIAA LLVLPSSYAE IPSTVNTQAD TFTWPGGGSL AVSLSYDDAL NSQLDNVIPA
LDKHNFKASF YVVVNSPVMN ARLDEWRAAA NNGHELGNHS VYHPCRASLP NKDWVKAHHN
LDHYSVAQMI EELEVANTFL KAIDGQSERT YTLPCGDMVI GADVSSRQQY LSQLNELFTA
VKGEGDDARF SLILYPEGQS GKELINYIRN IPADTLLVNI IFHGVGGDYL SVSSEAHSEL
LTFLASNRDA YYVDSYINLM KYADSKL
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