Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3108 |
Symbol | |
ID | 4280011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3719835 |
End bp | 3720608 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638135927 |
Product | methyltransferase type 12 |
Protein accession | YP_751784 |
Protein GI | 114564270 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTATT TAGCCATCAA TAAACACGCA TGGAACGAGC GAACTCAAAT CCACCTCGAC TCAACATTTT ATGACTTAGA GGCATTTATC CAAGGTAAGT CATCATTAAA CCCCATTGAA CTTGAACAAG TCGGCGATGT GCACCACAAA AGCCTGTTGC ACCTACAGTG TCACTTTGGA CAAGACAGCT TATCGTGGGC AAGGCTTGGC GCCAATGTCA CTGGCGTAGA TTTATCAAGC GAATCGATTG CAACTGCAAA AAAGCTGGCT GTTCAATTAC ACTTACCAGC AACATTCATC AACAATGACA TCTATCAATT TGGTTATCAC AATACAGAGC AATATGACAT CGTATTCACC TCTTATGGGG TGTTAGCTTG GTTACCCGAT TTAACTCGCT GGGCGCAAAC CATTGCAGGA GCATTACGTC CAGGCGGTGA ATTTCATTTG GTTGAGTTCC ACCCTTTTAA TGATGTGCTG TGTGGTTATG GCTACTTTCC ACAGACACAA CCGGATATCG AAGATGAAGT CACCTACACC GAAAACCACA ACGACCAAAT TGAAACGGTA GTCACTTGGC CGCACCCGAT AAGTGAAGTC ATTAGCGCAC TTATTAGTGC AGGACTCAGT ATCGAAGCGT TTAACGAACA CCCTTACAGT CCCTACAACT GCGTTGAAGG TTTGGAGTTT GTGGTAGGCA AAGGTTACCA GCTAAAACAT CAAGACCACC TTATCCCACT TATTTACTCT ATTAAAGCAA GCAAAGTGGG ATAA
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Protein sequence | MDYLAINKHA WNERTQIHLD STFYDLEAFI QGKSSLNPIE LEQVGDVHHK SLLHLQCHFG QDSLSWARLG ANVTGVDLSS ESIATAKKLA VQLHLPATFI NNDIYQFGYH NTEQYDIVFT SYGVLAWLPD LTRWAQTIAG ALRPGGEFHL VEFHPFNDVL CGYGYFPQTQ PDIEDEVTYT ENHNDQIETV VTWPHPISEV ISALISAGLS IEAFNEHPYS PYNCVEGLEF VVGKGYQLKH QDHLIPLIYS IKASKVG
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