| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3107 |
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| Symbol | |
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| ID | 4280010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3718707 |
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| End bp | 3719648 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135926 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_751783 |
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| Protein GI | 114564269 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAGAGTC TGTATTTATT TGGTGAGTGT ATGGTCGAAT TGCAACGTGT AACGGCCAGC
AGCTTGCAGC AATCTTTTGC TGGTGATGTG TATAACACAG GGGTTTATCT TAAGCGCACC
TTTAGTGATA TTAACACCCA CCTAGTCACA GCCATTGGCC AAGATAGTTT TAGCCAGGCC
ATGTTGCAAC GCTTTGAAGA TGAAAAAATT AATACTGATA TGGTCTTTCA AAGCACCGAC
AAAATTGCCG GTCTGTATGC AATACAAACT GACAGTAAAG GCGAGCGCAG CTTTACATAC
TGGCGCAACG ATTCAGCCGC CAAGCAAATC ATGCAATTTA TTGGCGATGC AGCCATCAGT
AAAATATCTC AGGCAGATAT GGTGTTTTTT TCGGGCATTT CTTTAGCAGT AATTAATGAA
GAAGATCGCG ACGCATTTTG GTTACTGATT AAACAATGCA AGCAAGCAGG TGTCAGTATT
GTATTTGACC CTAACTACCG CGCAAGAATG TGGCACAGTC CAGACCAGGC AAAGGCACAG
TTTGATATTG CGTTTAGTGT GGCCGATGTC GTACTGCCAG GTGTTGATGA CTTTAATCAA
CTTTACGGTA TTAGCTCCGT TGAAGACATT ATTGCGTTCT GCCAGCCTTA CGACATTAAC
GAGCTGGTGA TAAAAAATGG TGAAAACGGC ATTAATTATG TAATTAATGG TCAGCAACAG
CATTTCTCAA TCACACCAGT AACGAATGTT GTCGACACCA CATCAGCGGG GGACTCGTTT
AACGGGGTGT ATTTAGGCGC ACGCTTAACT GGCGCAGATA TCAGCACAGC GATAAAATTA
GCCTCCCAAG CAGCAGGATT TGTGATCCAA CATAAAGGTG CCATAGCACC TAAAATTGAG
TTTCATCAAT TTATTGAACG TCAAAAATTA ATCATGCAAT AA
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| Protein sequence | MKSLYLFGEC MVELQRVTAS SLQQSFAGDV YNTGVYLKRT FSDINTHLVT AIGQDSFSQA
MLQRFEDEKI NTDMVFQSTD KIAGLYAIQT DSKGERSFTY WRNDSAAKQI MQFIGDAAIS
KISQADMVFF SGISLAVINE EDRDAFWLLI KQCKQAGVSI VFDPNYRARM WHSPDQAKAQ
FDIAFSVADV VLPGVDDFNQ LYGISSVEDI IAFCQPYDIN ELVIKNGENG INYVINGQQQ
HFSITPVTNV VDTTSAGDSF NGVYLGARLT GADISTAIKL ASQAAGFVIQ HKGAIAPKIE
FHQFIERQKL IMQ
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