Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3105 |
Symbol | |
ID | 4280008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3717074 |
End bp | 3717421 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638135924 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_751781 |
Protein GI | 114564267 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCAAA GTGAGCATTT TTCATTTGGG GAACAAACCG AAATCGAGGA TATTGGCGGA GGGTTAAAGC GCCAAATGCT TGGATTTAAT CATGAACTCA TGGCAGTAAA GATTTGGTTT GATAAGGGAG CAGAAGGCTA TGTCCATGCT CACCGCCATT CACAAGTATC TTATGTGGTA GAAGGTGAGT TTCATGTCAA TGTCGATGGC GTGATTAAGG TGTTAACGGC TGGAGACAGC TTCTTTGTGC CACCTCATGT AGACCATGGT GCAGTTTGCC CAACTGGTGG TATTTTAATT GATACCTTTA GCCCGGCTAG AGAAGACTTT GTTGAGGGTT TATCATGA
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Protein sequence | MQQSEHFSFG EQTEIEDIGG GLKRQMLGFN HELMAVKIWF DKGAEGYVHA HRHSQVSYVV EGEFHVNVDG VIKVLTAGDS FFVPPHVDHG AVCPTGGILI DTFSPAREDF VEGLS
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