Gene Sfri_3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3105 
Symbol 
ID4280008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3717074 
End bp3717421 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content44% 
IMG OID638135924 
Productcupin 2 domain-containing protein 
Protein accessionYP_751781 
Protein GI114564267 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAAA GTGAGCATTT TTCATTTGGG GAACAAACCG AAATCGAGGA TATTGGCGGA 
GGGTTAAAGC GCCAAATGCT TGGATTTAAT CATGAACTCA TGGCAGTAAA GATTTGGTTT
GATAAGGGAG CAGAAGGCTA TGTCCATGCT CACCGCCATT CACAAGTATC TTATGTGGTA
GAAGGTGAGT TTCATGTCAA TGTCGATGGC GTGATTAAGG TGTTAACGGC TGGAGACAGC
TTCTTTGTGC CACCTCATGT AGACCATGGT GCAGTTTGCC CAACTGGTGG TATTTTAATT
GATACCTTTA GCCCGGCTAG AGAAGACTTT GTTGAGGGTT TATCATGA
 
Protein sequence
MQQSEHFSFG EQTEIEDIGG GLKRQMLGFN HELMAVKIWF DKGAEGYVHA HRHSQVSYVV 
EGEFHVNVDG VIKVLTAGDS FFVPPHVDHG AVCPTGGILI DTFSPAREDF VEGLS