| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3096 |
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| Symbol | |
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| ID | 4279999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3700647 |
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| End bp | 3703202 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135915 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_751772 |
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| Protein GI | 114564258 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAAT CAAAAAAATC TAAATTTGGT ATTAGCTCTT TGAGCTTAGC CATTTCATTT
GCACTTGCCG GATCTGTTGC AAGTGCTCAA GCATTCGCAG CCGATGAAGA AGTCGCAAAG
AAAGAAAACG TTGAAAAAAT CGCAGTAGTC GGTTCACGTG CAGCACCTCG TTCAATTGGT
GATTCACCGG TTCCAATTGA TATCATTAGC AGTGATGACC TAAAGAAAAA CGGTTCGACT
GACATGATCG ACATGTTAGT GACATCAGTG CCTTCTTTTA ACTCTCGTGC ACAACCGATT
AGTGATGCAG CAACGTTAGT TCGTCCGGTT AACTTACGTG GTTTACCATC TGACAGTACA
CTTATTTTGG TTAACGGCAA ACGCCGTCAT CGTGCGTCAG TTATTGCTTT CCAAGGTGGT
GGCATTAACG ATGGTGCACA AGGGCCAGAT ATTTCGGTTA TTCCTGGTGT GGCATTAAAG
CAAGTTGAAG TATTACGTGA CGGTGCAGCA GCTCAGTATG GTTCGGATGC GATTGCTGGT
GTGATGAACT TTGTATTAAA AGATGCCTCT GAAGGTGGCT CTATCACTGT CAGCCAAGGT
GAATACTACG AAGGTGACGG CGCAGCAACA ACAATTGACG GTAACATTGG TTTACCTTTG
ACTGATGATG GCTTTGTTAA TATCAGTGCA CAATATAAAA CCGCAGATGC GACTAGCCGT
AGTGTCCAGC GTCCAGATGC AGCAGCCATT GCTGATGCTG GTAATACCTC AATTCTTAAT
CCTGCGCAAA CTTGGGGTAA TCCAGAGATC AATGATGATT TTACTGTATT CGTAAACTCT
GGTTTTGATA TCAATGATAA CACTCACTTG TATGCATTTG GTAACGTGTC ATCACGTGAA
GCAACAGGTG GTTTCTATTA TCGTAATCCA CATAACCGCG GTAACGTTTA TTCAGTAGAT
GGTGGTGAAA CATTATTAGT GGGCGCTGTT AATGGCGACC AATCAACCTG TGGTGTCGTA
CCAGCAAATG TTCCAAACGT GCTTGATACT CCTGAGTATC AAGCAATGGT TGCCGATCCT
AACTGTTTCT CAATGAACCA AATTCGTCCA GGCGGGTATA CACCACAATT TACCGGTAAA
ATTGAAGATA TGTCTTTCTT CGCTGGTGTT AAAGGTGAGC TAGGCGAGTG GATGTATGAT
GCCAGTGCGG GTACCGGTAG CAACAAAGCC AGCTTTGGTT TAAAAAATTC TCTTAACCCA
TCATTGGGTT TAGACACGCC AACTGACTTT GATACCGGTT CTTACGAGCA AGTAGAAACA
ACTGTTAATA TCGACTTTAG CCGTTTCGTT ACTATTGGTA GCTTAGAAGA TATTAGTTTT
GCTACTGGTT TTGAATGGCG TGAAGAATCA TTCGAAATTG GTCAAGGTGA TGACGCCTCT
TGGACTGCAG GCCCTTATGC CGATCAGGGA TTCAATATTG GCTCACACGG CTTTAAAGGC
TTTGGCCCTG AATCAGCCGG TAAAAACGAC CGTAATAACA TTGGTATTTA TACTGACGTT
GAAGCGTATT TAACCGAAGA TTTCTTATTA GGTATTGCAC TTCGTTATGA AGATTTCTCT
ACTTTTGGTG ACACACTAAA CTACAAGTTA ACCGCGCAGT ATGTTGCAAC CGATGAATTA
TCATTCCGTG CATCACACAG TACTGGTTTC CGTGCGCCAA CTGTTGGTCA AGAAAACGTA
GTTAACACTC AAACATCGAT TGTTAACGGT GACTTGATTC AAACCTTCAT TGCTCCACCA
ACAAACCCAT TAGCGGCTTT CTATGGTGGT GAAGTTCTTA ATCCTGAAGA GTCTGTTAGC
TTTGCAGCAG GTTTCGTCTA CCAATATGAT AACTTGTTCT TAACTGTTGA TTACTACAAC
ATTGAAGTTA CTGGTCGTAT TGCACAATCT AGTCAAATCT CGGTTGAAGC AAGTGACTAT
GATGCATTAC GTGCTGCTGG TGTTGAATTC CCTGAGTTGA TCTCTGCGGT AACCTTCTAC
ACTAATGACT TTGATACAAC GACTCAAGGT GTTGATGTTG TAGCGTCTTA TACTACAGAA
ATGCTATCAG GTGATGCTAA GTTCAGTTTA GCTTATGGTT GGACTGATAC CAGTGTTGAT
AAATATGACC CTGAAACAAC AGATGCAGGT AAAGTTCGTC GTTTAGAAGA TGGTATTCCT
GCACACCGTG CAACCCTTAC TTGGGGCCAA AGCTGGGATG ATTTAAGCAT GTCAGTTCGT
GGTAATATGT ATGGTGAATA TTACGCTACA CACGCTGATG ATACCTCTGA TTGGGGTTCT
GAAGTGGCAG ACGCTGCAGT GACTATCGAT CTTGAAGTGA GCTATGCGGT ACTTGATAAC
CTAACGGTAT CAGTGGGCGC AAACAATATC TTCGATCAAG AAGCGCAGAA GCTAAAAGAT
GGCACTTTGG GTGAATTAGG TGCAGTGTAC TACGAGAGTG GTCCATTTGA TTACAACGGT
GGTTTCTACT ACGGCCGTGT TAATTACCGG TTCTAA
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| Protein sequence | MMQSKKSKFG ISSLSLAISF ALAGSVASAQ AFAADEEVAK KENVEKIAVV GSRAAPRSIG
DSPVPIDIIS SDDLKKNGST DMIDMLVTSV PSFNSRAQPI SDAATLVRPV NLRGLPSDST
LILVNGKRRH RASVIAFQGG GINDGAQGPD ISVIPGVALK QVEVLRDGAA AQYGSDAIAG
VMNFVLKDAS EGGSITVSQG EYYEGDGAAT TIDGNIGLPL TDDGFVNISA QYKTADATSR
SVQRPDAAAI ADAGNTSILN PAQTWGNPEI NDDFTVFVNS GFDINDNTHL YAFGNVSSRE
ATGGFYYRNP HNRGNVYSVD GGETLLVGAV NGDQSTCGVV PANVPNVLDT PEYQAMVADP
NCFSMNQIRP GGYTPQFTGK IEDMSFFAGV KGELGEWMYD ASAGTGSNKA SFGLKNSLNP
SLGLDTPTDF DTGSYEQVET TVNIDFSRFV TIGSLEDISF ATGFEWREES FEIGQGDDAS
WTAGPYADQG FNIGSHGFKG FGPESAGKND RNNIGIYTDV EAYLTEDFLL GIALRYEDFS
TFGDTLNYKL TAQYVATDEL SFRASHSTGF RAPTVGQENV VNTQTSIVNG DLIQTFIAPP
TNPLAAFYGG EVLNPEESVS FAAGFVYQYD NLFLTVDYYN IEVTGRIAQS SQISVEASDY
DALRAAGVEF PELISAVTFY TNDFDTTTQG VDVVASYTTE MLSGDAKFSL AYGWTDTSVD
KYDPETTDAG KVRRLEDGIP AHRATLTWGQ SWDDLSMSVR GNMYGEYYAT HADDTSDWGS
EVADAAVTID LEVSYAVLDN LTVSVGANNI FDQEAQKLKD GTLGELGAVY YESGPFDYNG
GFYYGRVNYR F
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