| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3056 |
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| Symbol | |
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| ID | 4279960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3663531 |
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| End bp | 3665084 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638135876 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_751733 |
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| Protein GI | 114564219 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit
[TIGR03324] alternate F1F0 ATPase, F1 subunit alpha |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTAG CGCCTGATTT ACTGCAAGCA ACCTTTGAGC AGACATTTTC GATTCTGCAG
CAAGCGCGAC GGTCTTTTTC GCCACAACTG CAACCACGAG AAATAGGCAC CATTACCAGT
ATTGCTACTG GCATAGCAAA AGTGTCAGGT TTACCTGGGG TCGGTTTTGA AGAAATACTG
AAATTCCCCA GTGATATTTT TGGCATTGCC TTTAATGTTG ATGAAGATGA AATAGGCGCG
GTACTGCTTG GGGATTACTG GCATTTGCAG GCAGGTGATG AAGTCGAACG CTGTGGGCAT
CTAGTTGATG TGCCAGTGGG AGAAGGCCTG CTCGGCCGTA TTATCAATCC TATCGGTGAG
CCCTTAGATG GCAAAGGCAG ACTGATTGCC AGTGCACGCT TACCCATTGA GCGTCCCTCT
CCTGCAATTA TGAATCGAGC ACCTGTTAGT GTGCCTTTGC AAACCGGCAT TAAAGTTATC
GATGCGCTTA TTCCTGTTGG CCTTGGGCAA CGTGAATTAA TCCTCGGTGA TAGGCAAACG
GGTAAAACCG CCATTGCCGT TGATACCATA CTTAATCAGC GTGACAAAAA TGTACTCTGC
GTATATTGCG CGATTGGTCA GCGCGCCTCA GGTGTGGCAA AAGTGATTGC GACACTGCAT
GAACAAGGCG CCTTAGAATA TACCGTTGTG GTGGTTACCG AAGGCAATGA TCCTCCAGGC
CTTGCTTATA TTGCCCCTTA TGCAGCGACC AGTATTGCAG AATACTTTAT GCAGCAAGGC
CGCAATGTAT TAATTGTGTA TGACGACCTG ACCCACCATG CCAGAGCCTA TCGAGAGTTA
TCTCTGCTGT TACGTCGGCC GCCCGGTCGT GAAGCTTTTC CCGGCGATAT CTTTTACATC
CATTCGCGAT TGCTAGAGCG GGCAACTCAC TTGAGCCCAA ATTTAGGCGG AGGATCATTA
ACCGCGCTAC CCATTATTGA AACCGAAGCG CAGGATATTT CCGCCTATAT TCCGACAAAT
CTTATTTCAA TTACCGATGG GCAAATATAC CTTTCACCCT CGTTATTTGA ATTGGGCGTA
CTGCCCGCTA TCGACGTCGG GAAATCGGTT TCTCGTGTTG GCGGTAAGGC ACAACGAGCC
GCTTACCGAG CGGTGGCATC AAATCTCAAA TTGGCTTATG CGCAGTTTGA AGAACTGGAA
ACATTTGCGA GTTTTGGCGC ACGATTGGAT GACAGCACAC TAAAAACTAT CGACCACGGC
CGACGCATTC GTGCTTGCCT GAAACAAGCA GAGTCCACGC CTATTTCGAT GATTGAGCAA
ATAGCAGTAT TACTGGCATT AACCGCTAAT CTATTTGATG AAGTCCCTTT AGATGTAATG
AGCCAAGCCG AGCATGCAGT ACGCGCGGCC ACTGCCGATA TCCCTGTTGA AATTACCGCA
AGATTAGCAA GCACCGAAAA ATTAACAGAT GAAGATCGCG ACGGGATTTT GCAGCCGGTC
CGTGATGCAC TTGCACCATT TATGCACAGT CAAAAGCGAA AGGAAATCAC ATGA
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| Protein sequence | MKLAPDLLQA TFEQTFSILQ QARRSFSPQL QPREIGTITS IATGIAKVSG LPGVGFEEIL
KFPSDIFGIA FNVDEDEIGA VLLGDYWHLQ AGDEVERCGH LVDVPVGEGL LGRIINPIGE
PLDGKGRLIA SARLPIERPS PAIMNRAPVS VPLQTGIKVI DALIPVGLGQ RELILGDRQT
GKTAIAVDTI LNQRDKNVLC VYCAIGQRAS GVAKVIATLH EQGALEYTVV VVTEGNDPPG
LAYIAPYAAT SIAEYFMQQG RNVLIVYDDL THHARAYREL SLLLRRPPGR EAFPGDIFYI
HSRLLERATH LSPNLGGGSL TALPIIETEA QDISAYIPTN LISITDGQIY LSPSLFELGV
LPAIDVGKSV SRVGGKAQRA AYRAVASNLK LAYAQFEELE TFASFGARLD DSTLKTIDHG
RRIRACLKQA ESTPISMIEQ IAVLLALTAN LFDEVPLDVM SQAEHAVRAA TADIPVEITA
RLASTEKLTD EDRDGILQPV RDALAPFMHS QKRKEIT
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