| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3049 |
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| Symbol | |
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| ID | 4279953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3658718 |
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| End bp | 3660181 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638135869 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_751726 |
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| Protein GI | 114564212 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit
[TIGR03305] alternate F1F0 ATPase, F1 subunit beta |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTTCA ATCTGGTTAT CGGAGATAAT CGACAGAATA TGATGGATAG AAAAAATGCC
TCACCCAATT CAGGTACAGT TATAGCGATA CGCGGTAGTG TCGTCGATAT TCTGTTTGCT
GAGCAACTCC CTCCTATTCG TTCCTTATTA ACTACTGGGC ACCAACATCA AATTTTAATC
GAAGTTTTTT CGCAATTAGA TGAACATCGA GTGCGCTGCA TTGCGCTAAC ACCAACACAA
GGGCTAGCAA GAGGCATGTT GGTAGAAGAC AGCGGCGGCC CCTTATTGGC ACCTGTAGGT
AAAACCATTC TGTCGCGCAT GTTTGATGTT TTTGGTAACG CCATTGATCG TAAGGCACCG
CCAATAGGTA CCCAATGGCG TTCAGTTCAT AACGAACCGC CGGCCATCGC TCAACTGGCG
ACTAAATCCC AAGTATTCGA AACGGGTATC AAAATGATCG ATGTGTTAAT GCCGCTTGAG
CGTGGTGGCA AAGCGGGGTT ATTTGGTGGT GCTGGTGTGG GTAAAACGGT ATTACTGACA
GAAATGATCC ACAACATGGT CGGCCAACAT GCTGGTGTGA GTATTTTTTG CGGTATTGGT
GAGCGTTGTC GTGAAGGCGA AGAGCTCTAC CGTGAGATGA AAACCGCAGG CGTGTTGGAT
AACATGGTAA TGGTGTTCGG CCAGATGAAT GAACCACCTG GAGCACGCTT TCGCGTAGGC
CATGCCGCAT TGACCATGGC CGAATATTTT CGCGACGATG AACATCGCGA TGTGCTGTTA
CTGATTGATA ATATTTTCCG TTTTATTCAG GCGGGTATGG AAGTGTCCGG TTTAATGGGA
CAAATGCCAG CCCGTTTAGG ATATCAACCA ACCTTGGGCA CCGAGTTGTC GCAACTCGAA
GACCGTATCG CCAATACTGA CAGCGGCGCG ATTACATCCA TTCAAGCGGT ATATGTACCA
GCAGATGATT TTACCGATCC CGCTGCGGTA CATACCTTTT CGCATCTCTC GGCATCAATT
GTACTATCGC GAAAACGGGC CAGTGAAGGC CTTTATCCAG CCATTGATCC GCTGCTATCT
AATTCAAAAA TGGCCACACC GAGCATTATC GGTCGAAGGC ACTATGACTT GGCGCAGAAA
ATACGCAGCA CACTGGCACA ATACGCAGAA CTTAAAGACA TTATCGCCAT GTTAGGCATG
GAACAATTAT CGCCAGCGGA TCATAAGATT GTGGCGCGCG CTCGTCGTCT CGAACGCTTT
TTTACCCAGC CTTTTTTTAC TACCGAACAG TTCACCAGTA TGCCCGGAAA GCTGGTGAGT
CTTAATGATG CTCTGGATGG ATGCGAACGA ATTTTACACG ATGAATTTAA AGACTATCCA
GAGAGTGCCC TATATATGAT TGGTTCAATT GATGAAGCTG TTAGCAAGTA TCGCCCTAAG
CTCGACAGAG TAAACAGTCA GTAG
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| Protein sequence | MHFNLVIGDN RQNMMDRKNA SPNSGTVIAI RGSVVDILFA EQLPPIRSLL TTGHQHQILI
EVFSQLDEHR VRCIALTPTQ GLARGMLVED SGGPLLAPVG KTILSRMFDV FGNAIDRKAP
PIGTQWRSVH NEPPAIAQLA TKSQVFETGI KMIDVLMPLE RGGKAGLFGG AGVGKTVLLT
EMIHNMVGQH AGVSIFCGIG ERCREGEELY REMKTAGVLD NMVMVFGQMN EPPGARFRVG
HAALTMAEYF RDDEHRDVLL LIDNIFRFIQ AGMEVSGLMG QMPARLGYQP TLGTELSQLE
DRIANTDSGA ITSIQAVYVP ADDFTDPAAV HTFSHLSASI VLSRKRASEG LYPAIDPLLS
NSKMATPSII GRRHYDLAQK IRSTLAQYAE LKDIIAMLGM EQLSPADHKI VARARRLERF
FTQPFFTTEQ FTSMPGKLVS LNDALDGCER ILHDEFKDYP ESALYMIGSI DEAVSKYRPK
LDRVNSQ
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