Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3035 |
Symbol | |
ID | 4279939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3641231 |
End bp | 3641734 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638135855 |
Product | hypothetical protein |
Protein accession | YP_751712 |
Protein GI | 114564198 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.21304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAGGTG CACAGTCGAC AGTTGATACT CAATCCGAAT CATTAAATGC TGACCGCTCT GCGTCCGTTG ATGGTCATCC AATTATTGTT GGTGCTTTTA TTAATATGTA TCAACAGCTT AATAAAGATA ATCTATTTTT ACTGCGCCAA GTTTACCGGG ATGATATTTG CTTTAGAGAT CCAATGCATC ATGTTGAGGG AATCGAAGCA TTAACCGATT ACTTTGCCAA CATGTATCAA AATGTCACTC ACATTGAGTT TGATATTAAA GAAGTGGTGA TCAGTGCTGA TAAGCAACAA GCAGCATTGT ATTGGACCAT GAGCTATTCA CACCCTAAAT TAAGTAAAGG CCAGCTGATT AATGTTGAAG GCATGTCGCA ACTTAAATTT TCCGATAAGA TTTTTTCCCA CAGAGACTAT TTTGATCTAG GCCAAATGCT GTACGAACAA GTACCGTTTT TAGGTGGCTT GATTGGCTTA CTTAAAAATA GGGTGACTAA GTAA
|
Protein sequence | MQGAQSTVDT QSESLNADRS ASVDGHPIIV GAFINMYQQL NKDNLFLLRQ VYRDDICFRD PMHHVEGIEA LTDYFANMYQ NVTHIEFDIK EVVISADKQQ AALYWTMSYS HPKLSKGQLI NVEGMSQLKF SDKIFSHRDY FDLGQMLYEQ VPFLGGLIGL LKNRVTK
|
| |