| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2971 |
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| Symbol | |
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| ID | 4279876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3569551 |
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| End bp | 3570747 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135791 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_751649 |
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| Protein GI | 114564135 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0482374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAATT TAGATCAAGT ATTGGCAGAG ATTAAGCGCG GTACCGATGA GATATTACTT
GAAGCGGATT TGCTTGAGAA ACTCAAAGAA GGGCGTCCAT TACGCATCAA GTTAGGTGCA
GATCCTACCG CTCCAGATAT TCATTTAGGT CACACGGTCA TCTTGAATAA AATGCGTACT
TTTCAAGAGC TTGGTCACGA AGTGATTTTT TTGATTGGTG ACTTTACCGG TATGGTCGGT
GATCCTAGTG GTAAAAACAG CACCCGTCCG CCACTGACTC GTGAACAAGT GCTTGCTAAC
GCAGAAACCT ATAAAGAGCA GGTCTATAAA ATTTTAGACC CAGCAAAAAC CCGCATCGAA
TTTAATTCTA GCTGGTTAGA GCCATTAGGC GCTGCTGGCA TGATCCGCTT AGCATCACAG
CAAACCGTTG CCCGGATGAT GGAGCGCGAC GACTTTAAAA AGCGTTATGC ATCAGGTCAA
TCTATTGCGA TCCATGAATT TATGTACCCT TTATTACAAG GTTACGATTC AGTTGCATTG
AAAGCCGATG TTGAATTAGG CGGAACAGAT CAAAAGTTTA ACCTGCTTAT GGGCCGTGAA
CTGCAAAAAT CTGAAGGCCA AAAGCCGCAG ACTGTCATCA TGATGCCATT GCTTGAAGGG
TTAGATGGCG TTAAGAAAAT GTCTAAATCG GCGCATAATT ATATTGGTGT GAGCGAGCCT
GCCAACGAAA TGTTTGGCAA ACTGATGTCG ATTTCTGATG ACTTAATGTG GCGTTATCTT
GAACTGTTGT CATTCCGTCC GTTAACTGAA TTAGCCCAAT TCAAGTTAGA CGTTGAAAAT
GGCACAAACC CACGCGACAT CAAGATTTTG TTAGCCAAAG AAATCATTGC TCGTTTTCAT
GATGAAGAGC AAGCACAAGC GGCACATCAA GCTTTTATCG ACCGTTTTCA AAAAGGTGCC
ATCCCTGATG ACATCGAAGA AGTGGTATTA GAAGCGGGAG AAGGCATAGC AATTGCTAAC
TTACTTAAAG ATGCAGGCCT TGTGGGTTCA ACCTCTGACG GTATACGTAT GATTAAGCAA
GGCGCAGTTA AAATGGATGG CGAGAAGATT GAAGACAGTC GCCAAATTTT TAATGCAGGT
CTTGAAGCGG TATTCCAAGT GGGTAAACGC AAATTTGCTA AAGTGATTTT AAAGTAA
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| Protein sequence | MANLDQVLAE IKRGTDEILL EADLLEKLKE GRPLRIKLGA DPTAPDIHLG HTVILNKMRT
FQELGHEVIF LIGDFTGMVG DPSGKNSTRP PLTREQVLAN AETYKEQVYK ILDPAKTRIE
FNSSWLEPLG AAGMIRLASQ QTVARMMERD DFKKRYASGQ SIAIHEFMYP LLQGYDSVAL
KADVELGGTD QKFNLLMGRE LQKSEGQKPQ TVIMMPLLEG LDGVKKMSKS AHNYIGVSEP
ANEMFGKLMS ISDDLMWRYL ELLSFRPLTE LAQFKLDVEN GTNPRDIKIL LAKEIIARFH
DEEQAQAAHQ AFIDRFQKGA IPDDIEEVVL EAGEGIAIAN LLKDAGLVGS TSDGIRMIKQ
GAVKMDGEKI EDSRQIFNAG LEAVFQVGKR KFAKVILK
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