Gene Sfri_2961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2961 
Symbol 
ID4279866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp3559894 
End bp3560574 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content46% 
IMG OID638135781 
ProductABC transporter related 
Protein accessionYP_751639 
Protein GI114564125 
COG category[R] General function prediction only 
COG ID[COG4136] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACAT TCGCGAGTAC TGCCAACCGC TCAAATACAA CCTCAACATC AGAACTCACC 
ATTGATGGGT TGATTTTGAG TCGCCAGCAA CAACACTTAC TATCATTAAG TGCGACTATT 
CGTGGCGGTG AAATCTTAAC CATTATGGGG CCGTCTGGCA GCGGAAAGTC AACGTTATTA 
AATTGGTTAA CGGGCATGTT GCCAGCGGGA TTTAGTGCTG AAGGTCAATT GCATTTAAAC 
GGCCAAAATA TCACCACAAC GGCCAGTCAT TTGCGCCACA TCGGTTTGCT CTATCAAGAC 
CCATTATTGT TTCCGCATTT ATCTGTGGCT GGCAACATCG GCTTTGCCAT GCCGCCAAGC 
TCCAAAGTAC AGCGACAAGC GGCAATTAGT GAAGCATTAA CCCAAGTGGG TCTTGGCGGA 
TTAGAGCAAC GTGACCCACA GAGTTTATCT GGCGGTCAGC AAGCCAGAGT GGCATTACTG 
CGAGTATTAC TGAGTCAACC TAAAGCCATA TTATTAGATG AACCCTTTAG TAAGCTCGAC 
AGTCAATTAC GTCAAGAGAC CAGACAGCTC GTTTTTGATC AAATACGCCA ACACCAGCTA 
CCCGCCATTA TGGTCACTCA CGATCAAACT GATGCCGATG CAGCCGAAGG TAAGATCATC 
TCACTTGATA AAAAAAATTG A
 
Protein sequence
MQTFASTANR SNTTSTSELT IDGLILSRQQ QHLLSLSATI RGGEILTIMG PSGSGKSTLL 
NWLTGMLPAG FSAEGQLHLN GQNITTTASH LRHIGLLYQD PLLFPHLSVA GNIGFAMPPS 
SKVQRQAAIS EALTQVGLGG LEQRDPQSLS GGQQARVALL RVLLSQPKAI LLDEPFSKLD 
SQLRQETRQL VFDQIRQHQL PAIMVTHDQT DADAAEGKII SLDKKN