Gene Sfri_2924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2924 
Symbol 
ID4279829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3513743 
End bp3514267 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content40% 
IMG OID638135744 
Producthypothetical protein 
Protein accessionYP_751602 
Protein GI114564088 
COG category[S] Function unknown 
COG ID[COG4539] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCGG CAGTAGAACA ACTTTCAACT TATAAAAGTG TGCATTTAAA CCCACAAAAC 
ATAAAGACGC ATTTTGTCGG TGTTCCAATG ATTATCTGGT CGGCTTTTTT GATGCTGGGG
ACACTTCGCT TTGCATGGCA GGATTATCAA GTGAGTGCTG CGATGATATT AGCTGTTGTG
GTATTGGGCT ACTATATGGC ACTTCATATG CGCCTGGCAC TTGGATTAGT ATTGTTCATT
CTGCCGGTGT TATATACCAC TGAGCTTGTT GTTCATACTT CACATCCCTT TATCATTGCC
ATTAGTATTT TTGTTATTGG CTGGGTTATT CAGTTTATTG GCCATAAATA TGAAAAGGCT
AAACCTGCTT TTATGGATGA TCTCAATCAG CTTCTGATTG GGCCATTCTT TTTGATGGCA
GAGTTGTATT TTATATTGGG TTTGGAGAAA GACTTAGCCG CAGAAATTAC CCCAATCGCA
CGTGATAAAC GCCGTGCTTT AGAGGCTAAA CGTCGTGCGT TGTAA
 
Protein sequence
MKSAVEQLST YKSVHLNPQN IKTHFVGVPM IIWSAFLMLG TLRFAWQDYQ VSAAMILAVV 
VLGYYMALHM RLALGLVLFI LPVLYTTELV VHTSHPFIIA ISIFVIGWVI QFIGHKYEKA
KPAFMDDLNQ LLIGPFFLMA ELYFILGLEK DLAAEITPIA RDKRRALEAK RRAL