| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2860 |
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| Symbol | |
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| ID | 4279765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3443390 |
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| End bp | 3444076 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135678 |
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| Product | hypothetical protein |
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| Protein accession | YP_751538 |
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| Protein GI | 114564024 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00719508 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAA TAGCAGACAG AATATCAATC GCCCAGAGTA GAATTAATCA AGCGGCGCAA
AAGTGTTCAC GTTCATCGGC CGAAATAAGC CTACTTGCTG TGAGCAAAAC CAAACCCATT
AGTGACATAG TTGCAGCTTA TCAAGCGGGG CAACGTCTAT TTGGCGAAAA CTATGTCCAG
GAAGGCGAAA CTAAGATTAA TGCCTTACAG GCAGATTATC CTGATATTGA GTGGCATTTT
ATTGGCCCGC TGCAATCGAA TAAAACCAAA ATTGTTGCCG AACATTTTGA TTGGATGCAT
ACCTTAAGCC GCGCTAAAAT AGCCCAACGT TTACATGAGC AACGTCCAAT TAACAAGCAG
CCATTAAACG TGTGCATTCA AGTTAATATT AGCCAGGAAC AATCTAAGTC GGGCGTTAAT
GCTGAAGATG TCGCCATGTT AGCACTTACT ATCTCCTCCT TAAGCAACCT TAAGTTACGC
GGATTAATGG CTATCCCAAC GGCAACTGAT GACATACAAC TTCAACAACA AGAATTTAGC
CAATTGAAGC AAATTTTTGA CCAACTTAAG CAGCAATATC CTAGCGTTGA CACTCTATCA
ATGGGCATGA GCGGCGACAT GGACATCGCC ATCGCTAATG GCTCAACCAT GGTACGCATC
GGCAGTGCGA TCTTTGGTGA AAGATAA
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| Protein sequence | MTTIADRISI AQSRINQAAQ KCSRSSAEIS LLAVSKTKPI SDIVAAYQAG QRLFGENYVQ
EGETKINALQ ADYPDIEWHF IGPLQSNKTK IVAEHFDWMH TLSRAKIAQR LHEQRPINKQ
PLNVCIQVNI SQEQSKSGVN AEDVAMLALT ISSLSNLKLR GLMAIPTATD DIQLQQQEFS
QLKQIFDQLK QQYPSVDTLS MGMSGDMDIA IANGSTMVRI GSAIFGER
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