| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2840 |
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| Symbol | |
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| ID | 4279745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3421654 |
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| End bp | 3422523 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135658 |
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| Product | SMP-30/gluconolaconase/LRE domain-containing protein |
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| Protein accession | YP_751518 |
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| Protein GI | 114564004 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.127595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATAA TTAATTCTAG TATGACCTTA GGGGAAGCAC CAATCTGGCA TAATCAACGT
CAAAGCTGGT TATGGTTAGA TATTATTAAT AAACAGTTAT TCGAATTACC CCATCATGAC
CGAGAACAAC AGCCGTCGGT ACATCGTTTC TCTTTGATGC CCTCAATTAT TGTAGAGCAG
CCTAATGGTT GTGTTTTGGT GATAGCGCAA TATCAGATGA TAGAGCTTGA TCTTGAAAGT
GGTTTGCAAA CCCTGTTGTG TACTCTACCG GTACCAGAAG GGTTCAGAAC CAATGATGGT
GGTGTTTGCG ATAATGGCTT ATTATGGTTC AGTACCATGC ATAAAACCTC ACCCCTGAAG
TTTCCTGGTA GTATTTATGT TATTGACCAA CGGCTTAATA TTAAATGCCA ATTATTAAAT
CAAATCCACA TTGCTAATAC GTTTTGTTGG GTAACGGTTA ATAGAGTCCT CATTAGTGAC
TCTTTACTGC AGTTAATGTA TGACGTTCCA TACCATAACG GTGTGCTAGA GTGGCATAAT
AAAATCGTAT TTGATGATTT ATCATCAACG AATGCCGCCC ATGATGGTGG AGCTATTGAT
GTATTCGGAC AGATTTGGAA TGCGCAATGG GCGGCGGGGC GTGTACGATG TTATCAGGCG
TCTGGTGCTG TAGTAACTGA TGTTTCTTTA CCAGTATTAC AACCAAGTAG TTGCTGTTTT
GGTGGGCCAG AAAATAAGCA TTTATTGATT ACCTCAGCCA CAGAGGGAAT GAATGCAAGA
CAGATTAAAC AATTTCCGTT GTCTGGGAGT ATTTTTTTAT TAGAGCTGGA CGTTGAAGGG
CGATCTATCC CGATCTTTGA AATGGACTAA
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| Protein sequence | MTIINSSMTL GEAPIWHNQR QSWLWLDIIN KQLFELPHHD REQQPSVHRF SLMPSIIVEQ
PNGCVLVIAQ YQMIELDLES GLQTLLCTLP VPEGFRTNDG GVCDNGLLWF STMHKTSPLK
FPGSIYVIDQ RLNIKCQLLN QIHIANTFCW VTVNRVLISD SLLQLMYDVP YHNGVLEWHN
KIVFDDLSST NAAHDGGAID VFGQIWNAQW AAGRVRCYQA SGAVVTDVSL PVLQPSSCCF
GGPENKHLLI TSATEGMNAR QIKQFPLSGS IFLLELDVEG RSIPIFEMD
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