Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2838 |
Symbol | |
ID | 4279743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3420049 |
End bp | 3420747 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638135656 |
Product | acylneuraminate cytidylyltransferase |
Protein accession | YP_751516 |
Protein GI | 114564002 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1083] CMP-N-acetylneuraminic acid synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0478291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA AAATAGTAGT GTTGCTACCA ATGAAGGCCA ATAGCACAAG AGTTAAAGGT AAAAACTTTA GAGATTTTTG TGGTAAACCA CTTTTTCGTT GGATTTTAGA TAGTTTGTTA GCTGTAGAGG ATATAGATCA AATTGTCATC AATACGGATG CAAGAGATAT TTTGGCTGAG AATGGCTTGG TAGGTACGGA TAGAATATTA ATTAGAGATC GAAAAAAAGA GATCTGTGGT GACGAAGTTT CCATGAATCG TGTATTAGCA GATGATGTAG AAAATGTCGA GGCAGATATT TATCTTATGA CTCATACTAC CAACCCATTA TTATCTTCTA ACACAATTAA GCAAGCCATT AACCAATATA ATGAAGAGCT AGCTTCTGCT TCTGCTGACT CACTGTTTAC TGTTAATAAA ATACAAACTC GATTTTATAC TGCGAAGTGT GAACCGATAA ATCATGATCC GGATAACTTA ATTCCAACTC AAGATTTAGA ACCTTGGTTT GAAGAAAACT CTAACTTGTA TTTATTTAAC CGAGAAAGTT TTGCCAAAAC AAATGCTCGC ATTGGGGCAA AGCCTTCAAT GATGGTTTCA CCAGCAATGG AGTGTTCGGA TATTGACACT CCAGATGATT GGGATCAAGC CGTAGTGATG ACGCATTATA TGTTAGAAAA AGGGTTTGTA AAACTATAA
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Protein sequence | MKKKIVVLLP MKANSTRVKG KNFRDFCGKP LFRWILDSLL AVEDIDQIVI NTDARDILAE NGLVGTDRIL IRDRKKEICG DEVSMNRVLA DDVENVEADI YLMTHTTNPL LSSNTIKQAI NQYNEELASA SADSLFTVNK IQTRFYTAKC EPINHDPDNL IPTQDLEPWF EENSNLYLFN RESFAKTNAR IGAKPSMMVS PAMECSDIDT PDDWDQAVVM THYMLEKGFV KL
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