| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2836 |
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| Symbol | |
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| ID | 4279741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3418323 |
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| End bp | 3419084 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638135654 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_751514 |
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| Protein GI | 114564000 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.194663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAGA AATTTACAAA TAAGAAGTGG GCATTGATTA CAGGTGCTTT AGGTGGAATT
GGCAAAGCCT TAGTTAAAGA ATTTACCAAT GACGGCTATA GTGTCTTGGC AACAGACTTA
AAAATTTGTA ATGATAACTT TGATAATGTT TGTTTTTTAC AGCTTGATTT GGAAAGTTTT
GTTCTAGATG AAGCATATGC TGCGGAGTTC TATAAAAAAG TAAACGCAGT TACTGATGGT
GTAGGTATTA CGAGCTTAAT TAATAATGCC GCAGTGCAAA TTCTCGCCGA CACGCGCTTT
ATTTCAAGAC AACAATGGAA TACAAGCTTT AACGTTAATT TGTCTGCACC TTTCTTTTTG
ACTCAGCTAT TTATTGATGA TTTAGATCGT AATTCTGGAT CAATAGTCAA TATCAGTAGT
ATCCACGCAA CACAAACTAA AAAACAATTT GTTGCCTACG CTACTACTAA AGCGGCGTTA
AGCTCTATGA CTCGCAATAT GGTATTAGAT ATAGGTAATC GAGTAAGAAT AAATGCTATA
GAGCCAGCTG CAATTGCTAC TGATATGCTC AAAGCTGGTT TTTATGGAAA AGATGAACTA
TACAAACGGT TGGAGATGTT TCATCCGCTT GGTCGTGTTG GTACCCCCAG TGAAATTGCA
AAGCTTGCTG TTTTTTTAAC TTCTGATAAT GCTGGTTTCG TTCAAGGGGC TTGCATTAGT
GCAAGCGGTG GCATACAGGG CTGTTTAAGT GATCCAATAT AA
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| Protein sequence | MQQKFTNKKW ALITGALGGI GKALVKEFTN DGYSVLATDL KICNDNFDNV CFLQLDLESF
VLDEAYAAEF YKKVNAVTDG VGITSLINNA AVQILADTRF ISRQQWNTSF NVNLSAPFFL
TQLFIDDLDR NSGSIVNISS IHATQTKKQF VAYATTKAAL SSMTRNMVLD IGNRVRINAI
EPAAIATDML KAGFYGKDEL YKRLEMFHPL GRVGTPSEIA KLAVFLTSDN AGFVQGACIS
ASGGIQGCLS DPI
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