| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2818 |
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| Symbol | |
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| ID | 4279723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3396884 |
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| End bp | 3398959 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638135636 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_751496 |
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| Protein GI | 114563982 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAGTT ATTCCGCGGC GTCATTAATT TTGTCGCTAG GTGTTATTGG GGTGAGTGAA
GCCAGTGTGG TGGATGACTC GATAAATACG TCTGGGCAGA GTGCAAACCA CAGTGAGAAT
GACAGTAAGA GCCACAGTGA AAATCCTGAA CATTCTGAGC ATGATGCCCC AAAAGCGGAT
GTTGATGAAC ACGAACATGA AGAAGAGATG GAAACCATTG TCATACAAGC CACTCGTTCT
GGGCGAATTG CCGATGAACA ACCTATTCGA GTCGAGGTGA TTAATCGCGA AGAGATTGAA
GAAAAAGCGG CGATGAGACC AGGTAATATT TCAATGCTGG TGGCTGAAAC GGGTGGGGTA
AGATTACAAA CAACTTCACC GGCGTTAGGC AGTGCCAATA TTCGCCTACA AGGCTTGTAT
GGTCGTTATA CCCAATTACT GGCCGATGGT TTACCGTTGT ACGGTAACCA AGCTGGGTCG
ATAGGGTTGT TGCAAGTGCC GCCGACTGAT TTAAGTCGCG TTGAAATTAT TAAAGGCTCG
GCATCATCAC TTTATGGTGG GTCTGCACTC GGCGGGGTAA TTAACCTTGT GTCTCGAACG
CCTGGTGATG AACTCAGTGG TGAAGTGTTG GTCAATGCAA CCACGCGCGA TGGTCAGGAT
GTGACCACCT ATTTTGAGTC GCCATTGAGC GAGAATGTAA AAGGGTCGGT GACGGCAGGG
GCTCATTATC AAGACAAGCA AGATATTGAT AAAGACGGCT GGATCGATCT GGCAGGTTAT
GAGCGATACA CAGTGCGTCC TCGATTATTT TGGGAAGGGC AAGAAGGGCA AACACTGTAT
GTGACTAGCG GGTTTATGAC CGAGCAGCGT ACTGGCGGTA CTTTAGGTGA TAACATGGTC
GCTGATGGTA CTTCGTTTGA GCAATCGCAG GATTCCGATA GGCTTGATGG CGGCCTAGTG
TTTAGTATGC CGTTATTAGA GTCATTGACG TTTAATACTC GCGCATCGGC GATGGTACAA
GATCATGTGC ATGTTTATGG TGCCGATATA GAAGAAGACC AACACGAGAG TTATTTACTT
GAAAATAGCA TCGCAGGTTA TACCGATAAC AGTGATTGGG TTGTTGGTTT AGCCTATCAG
TCTGAAATCT TTGCCTCTGA CACTTTCCCT GAGTTTGATT ATTCTTATAA AGTGCCGGGT
GCATTTGCTC AACTTGATTA TGAGCTGACA GACCAAATCA CCACATCTTA CAGTGCGCGC
ATTGATGATC ACAGCGAATA TGGTACTCAA TTTAGCCCAA GAGTGTCGGT GCTTTATCGC
CCAAGTGACT TAACCATAAG AGGCTCTTAT GGGGAGGGGT ACTTTGCCCC TACGCCGTTT
GTTGAAGAGA TTGAGGCCGC CGGATTATCA AGATTAGCGC CGATTGACAA CTTACAAGAA
GAGCGCGCTA AAACGGCATC GCTTGATGTG AGTTATACCT TTGATGATGT GGAAACGAGT
TTGACCTTGT TTGGCTCAAA TGTGGATAAC GTCACTGGAT TAGAGGCTTT CTCTGCCAAT
AACGATGGCA CCTTAGACGC AGTTAGGTTA GTTAATGCAT CTGGTGAAAG TCAGATCCGT
GGTTCTGAAG TGTTGCTGCG TTACTATTTA GGCGATGTTA AGTTGACCGC AAGTTACTTG
TATTTAGACG CAACTGAAGC TTCACCCGAC GGGGACGGCA GAAGAGCCAT TGCCTTAACA
CCACGTCATT CTGGTGGTTT TGTTGCTATG TGGGAGCAAC ATGGCAACTT TAGAGCTGGT
TTTGAAGCTT ATTATACCGG CACCCAAAAC GTTAACGATA ACCCTTATAT TGATGAAACC
AACCCTTATT GGCATCTTGG TTTAATGGGA GAAATTACTG TTGGCAGAGT CAGTTGGTTT
ATTAACTTAG AAAACTTACT CGATGTAAAA CAAACCGATG AACATCCAAT GTTACTGCCT
AATAGATCGC CTAGCGGCCA ATGGACTACC GATATTTGGT CACGTAACGA TGGCTTTATT
GCTAACGCAG GTGTAAGAGT TAAATTTGGT CATTAA
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| Protein sequence | MLSYSAASLI LSLGVIGVSE ASVVDDSINT SGQSANHSEN DSKSHSENPE HSEHDAPKAD
VDEHEHEEEM ETIVIQATRS GRIADEQPIR VEVINREEIE EKAAMRPGNI SMLVAETGGV
RLQTTSPALG SANIRLQGLY GRYTQLLADG LPLYGNQAGS IGLLQVPPTD LSRVEIIKGS
ASSLYGGSAL GGVINLVSRT PGDELSGEVL VNATTRDGQD VTTYFESPLS ENVKGSVTAG
AHYQDKQDID KDGWIDLAGY ERYTVRPRLF WEGQEGQTLY VTSGFMTEQR TGGTLGDNMV
ADGTSFEQSQ DSDRLDGGLV FSMPLLESLT FNTRASAMVQ DHVHVYGADI EEDQHESYLL
ENSIAGYTDN SDWVVGLAYQ SEIFASDTFP EFDYSYKVPG AFAQLDYELT DQITTSYSAR
IDDHSEYGTQ FSPRVSVLYR PSDLTIRGSY GEGYFAPTPF VEEIEAAGLS RLAPIDNLQE
ERAKTASLDV SYTFDDVETS LTLFGSNVDN VTGLEAFSAN NDGTLDAVRL VNASGESQIR
GSEVLLRYYL GDVKLTASYL YLDATEASPD GDGRRAIALT PRHSGGFVAM WEQHGNFRAG
FEAYYTGTQN VNDNPYIDET NPYWHLGLMG EITVGRVSWF INLENLLDVK QTDEHPMLLP
NRSPSGQWTT DIWSRNDGFI ANAGVRVKFG H
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