Gene Sfri_2814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2814 
Symbol 
ID4279719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3391219 
End bp3392361 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content40% 
IMG OID638135632 
Producthypothetical protein 
Protein accessionYP_751492 
Protein GI114563978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTTA AAAGTTTATT TGAATCTACA ACCGCTATGG CATCTAGAAT GAACATACTA 
CCTAAAATAG TGTTGTTATC TAAAACGCGA GTGATTGCGT CTTTAGTGTT ATTGGGTAGT
TTATTTACCA GTACTGTATT TGCTGCAGAT TATTCAGTGT TCCGCGAGTT AGACAGCCAA
CATCCCCCTG GTAATGTGGC CGTGTCATCT ACTGGGCGAG TTTTCATGAG TAATCATCAT
TTTTACGGTG TTGATTCGAG AATTGTCGAG CTTAAAAAAG ATGGATCTAT CGTCGATTAC
CCCAATACAG AATTTAATCA AAATCTTAAT CCTGTTTTGG GCGTGGTAAT TGATGAACAG
GGTATTTTAT GGATGCTTGA AACTGCTTCT ACTGACGGTG TCGGGCGACT TATCGGTTGG
GACACTCAAC AAAACCGTTT ATATAAAATG ATTTCTTTAG CGGCACCAGT ATTGCCTAGT
AATTCATTTT TAAATGATCT TGCGGTTGAT AGGCAACATG AAACGGTATA TATCACCGAT
CCTGCTGGTG GCAGTAATGC GGCATTAATT GTGGTTGATT TAACGAGTGG CACAGCAAGA
CGAGTATTAG ATGGCAGCGT TTATACCCGT CCTGAAAATG TTGATACGGT GATTAATGGC
AATACTTTAT CTATCGGTGG CCAGCCTATT CGTATTGGGG TTGATTCACT GACCATAGAC
CCTAATAACG AGTGGGTTTA TTTTGGTGCA TTAAGTGGTG AGAAGTTATA TCGGGTGCAC
ACTCAATATC TACTAGATGC TAATTTATCG GCCAATATGT TACGCAGCAA AGTGGAGTTT
TATGCTAATA AGCCTGTCAG CGACGGCATA ACCATTGATA ATGGCGGCAA CATTTATGTT
ACTGATATAA GCAATAATGC TGTCGGTTAT ATCGACACAG ATCGTCAATA TCATATTTTG
CATCAAGATA GTGACAAGTT CAGTTGGTCT GACGGTTTTT CAACTACGGC CGATGGTAAG
TTGTTAGTTA CAGTAAATAA ATTTCACCAG TCTCCAGCGG TTAATAACCA GCAAGACAAA
AGTGATGGCC ACTATTATAT CATTGAGTTT GACGCATTAA CCGAAACGAC AGTTGGGCGT
TAG
 
Protein sequence
MMFKSLFEST TAMASRMNIL PKIVLLSKTR VIASLVLLGS LFTSTVFAAD YSVFRELDSQ 
HPPGNVAVSS TGRVFMSNHH FYGVDSRIVE LKKDGSIVDY PNTEFNQNLN PVLGVVIDEQ
GILWMLETAS TDGVGRLIGW DTQQNRLYKM ISLAAPVLPS NSFLNDLAVD RQHETVYITD
PAGGSNAALI VVDLTSGTAR RVLDGSVYTR PENVDTVING NTLSIGGQPI RIGVDSLTID
PNNEWVYFGA LSGEKLYRVH TQYLLDANLS ANMLRSKVEF YANKPVSDGI TIDNGGNIYV
TDISNNAVGY IDTDRQYHIL HQDSDKFSWS DGFSTTADGK LLVTVNKFHQ SPAVNNQQDK
SDGHYYIIEF DALTETTVGR