| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2761 |
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| Symbol | |
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| ID | 4279667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3317510 |
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| End bp | 3318412 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135580 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_751440 |
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| Protein GI | 114563926 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.015422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAT TAACGTTTGG TCAAACCGGT CAACTCGCCA GAGCCTTAAA ACGTGTTCAG
CCCAAAACTG CAGAACTAAT CCAACTCAGC CATCAACAAG TTGATATTAC TCAGCCACAA
CTCATTGATG AAGCGTTAGC TTTTTATCGG CCCGATATCA TCATCAACTG CGCGGCTTAT
ACTGATGTAG AAAAAGCACA AATAAACCCA GTCGCAGCAA TGCAAATCAA TGCATTGGCC
GTTGAGTATA TGGCAAAAGC AGCCAGTAAT TATGGAATCA AACTAATTCA ATTGTCGACT
GATTATGTAT TCGATGGTCG CTCATCGACA CCTTATTCTG TGACACAAAA ACCATCAACC
ATTAATGCTT ATGGGCAGTC AAAATTACTC GCCGAAGAGA CATTATTGAG CTATCAATCT
GCTCTATTTT GTATTGTGCG AACTTCTTGG CTTTACCATC ACAGCGGCAA TAATTTTGTT
ACCACTATGC TAAAGTTAAT GACGCAGTCA CATAATCAAC AAACGATAGG ATCAAGCGCA
GACAACCCCA TCAAAGTTGT TAACGACCAA ACGGGCAGCC CGACAATGGT TGACGATTTT
GCACGTTTTC TGTGGAAACT GTGTTCACAA AAACAATGGT CAGCGATTTA CCATTGGAGT
AATGCAGGTA AGTGTACTTG GTATGAGTTT GCTCAAGAGA TCAAAACACA AGGAATAGCG
TTAGGCTTAT TACCTCAGTC AATTTATTTA CAACCTATTA CATCAGAACA ATATGCTTCT
ATCGTTAATA GACCCGCTTT CAGTGTGTTA GACACCCGCT TATCACACAC ACTCGCCATA
CCAAAACCTT GGCAACAACA ATTAGCTCAA TGCCTTAATG AGCTGGTGCT GAGTAAAGTT
TGA
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| Protein sequence | MKILTFGQTG QLARALKRVQ PKTAELIQLS HQQVDITQPQ LIDEALAFYR PDIIINCAAY
TDVEKAQINP VAAMQINALA VEYMAKAASN YGIKLIQLST DYVFDGRSST PYSVTQKPST
INAYGQSKLL AEETLLSYQS ALFCIVRTSW LYHHSGNNFV TTMLKLMTQS HNQQTIGSSA
DNPIKVVNDQ TGSPTMVDDF ARFLWKLCSQ KQWSAIYHWS NAGKCTWYEF AQEIKTQGIA
LGLLPQSIYL QPITSEQYAS IVNRPAFSVL DTRLSHTLAI PKPWQQQLAQ CLNELVLSKV
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