| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2754 |
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| Symbol | |
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| ID | 4279660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3309807 |
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| End bp | 3311207 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638135573 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_751433 |
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| Protein GI | 114563919 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.762714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGC ACAAAGCACA CATTAAGCCA AAGATTATGA ATCAGAATTT AGAGCAAGTA
TTACTGGCTG TCAGCCAGTC TGAATTGATT GATACCGGCG ACTTAGATTC GGCTTCAAAA
TTGATTATCG ATTCAGTTTG TCGCGGACTT GACATTGATA GGGCGGGTAT ATGGCTGTTA
ACCGAAGATA ACCAATCAAT CGGTTGTTTT TTATTAGTTG ATAATCAAAC TAAGCAAAAT
AATATCACGC TAACTCGCTT AGAATTTCCG GGGTATTTTC GCGCCCTAGA TACAGAAAGA
ACAATTGCTG CCAGTGATGC GATGACAGAT CCTGCGACCT GTGAGTTTAA AGATATTTAT
TTGCGTCCCA ATGCAATCAC AGCCATGTTA GACAGCCCAA TAAGACATGC TGGTAAAATG
ATCGGAATTG TCTGTTGCGA GCATAAGGGG GGAATTAGGC ATTGGAGCCG TGATGAGCAA
TCATTTGTGA GCTCTTTGGC TGATTTGTAT GGTAGGGCTG TCAATGCGAA AAAGGTCAAA
GCTTATCAAA ATGAACTTGA ATTGAATAAT GTTGCCTTAG AAGCAGAAGT TGAAAAGCGA
ACTGCGGAGT TAAAAAATGC GATAAATAAC TTACAAGCGA CACAAGCCAG TTTAATAGAG
AGCGAAAAGC TTGCCGCCTT AGGTAATCTT GTTGCTGGTG TTGCACATGA AGTGAATACT
CCATTAGGTA TTTCGGTGAC ATCAACCAGT CACTGTATCG ATGAGTTAAC TAAACTCAAA
ACCTTATTCG CCGCGGGTGA ATTAGAACAA CAAGACTTTG AAGAGTTTAT CCATACACTA
ACTGACGGAT TACATTTAAT TGAACGTAAT TTATCGCGTG CCGCAGAGTT AGTTCATAAC
TTTAAACGCA CAGCAGCTGA CCAGCTTATT TTAGAAAAAG AGCAGGTTAA TTTAACTGAA
TATTTGGAGC AAATATCTTC CCCTCTTAGG CCATTAACCC GTAAGCAAGG TATCGAACTT
GATATTCAAA TAGAACCAGA CTTGGTTGTT GAATCTTATC CTGGTGCTAT AGCACAAATC
TTTACTAATT TGGTGTCCAA TTGTTTTCGA CATGCATTTC CTGCTGATTT TGTAGGACAA
AAGCGAATTA TATTAGGCGC AAATTACTGT GGTGATGAAA TAAAGATGTT TTACAAAGAT
AATGGTAAAG GCTTGAGCCC TGAAGTAAAG CGTAGAATAT TTGAACCTTT TTTTACTACT
GCACGCAATA TTGGTGGCAC AGGGTTAGGC ATGTCTATTG TGTATAATCT AGTAACGCAA
AAATTAGGCG GTAGGCTTGA GATTATTTCA GAGTTGAATC AAGGCCTTGA AATCGATATT
TATATCAAAA ATATTACATA A
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| Protein sequence | MNLHKAHIKP KIMNQNLEQV LLAVSQSELI DTGDLDSASK LIIDSVCRGL DIDRAGIWLL
TEDNQSIGCF LLVDNQTKQN NITLTRLEFP GYFRALDTER TIAASDAMTD PATCEFKDIY
LRPNAITAML DSPIRHAGKM IGIVCCEHKG GIRHWSRDEQ SFVSSLADLY GRAVNAKKVK
AYQNELELNN VALEAEVEKR TAELKNAINN LQATQASLIE SEKLAALGNL VAGVAHEVNT
PLGISVTSTS HCIDELTKLK TLFAAGELEQ QDFEEFIHTL TDGLHLIERN LSRAAELVHN
FKRTAADQLI LEKEQVNLTE YLEQISSPLR PLTRKQGIEL DIQIEPDLVV ESYPGAIAQI
FTNLVSNCFR HAFPADFVGQ KRIILGANYC GDEIKMFYKD NGKGLSPEVK RRIFEPFFTT
ARNIGGTGLG MSIVYNLVTQ KLGGRLEIIS ELNQGLEIDI YIKNIT
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