Gene Sfri_2752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2752 
Symbol 
ID4279658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp3307297 
End bp3307911 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content45% 
IMG OID638135571 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_751431 
Protein GI114563917 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0296384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACA TAGATTATCA AGCACAACAT AAGAAACGCT TATCATGGAT GCCATGGCTG 
TATTTTTCAC TTAAACCAAA GCATTTATCA TGGGCAAAAC CTTGGCAAGA TGACATTCAA 
CAACGGTTAT GTCAGCTTGA AACCATTCAT ATAGGTGAAC AGTGTTTTAT TGCCCCACAA 
GCTCAGCTTT TTGCCGAACC GGGTCGTGAT ATCTCTATAG GTAACCAATG CATGATTGCC 
GCGGATGTGT TTATGCATGG TCCAATCACC CTAGGCAATG AAGTGGCCAT TAACCATGGC 
TGTAGTATAG ACGGGGGCCG AAATGGTATC AAAATTGGCA ACCAAACTCG TATTGCTAAC 
AACGTCACGA TTTATGCCTT TAACCATGGC ATGTCACCCA GCGAACCCAT TTATAAACAA 
CCCGCGACAT CAAAAGGTGT AGTGATAGGC CAAGATGTAT GGATTGGCGC TCAGGCGGGC 
ATTGTTGACG GTGTCACCAT TGGAGATTGT GCGGTGATTG GCATGGGCTG CATTGTCACA 
AAAGATGTAC CCAATTTTGC TATTGTTGCT GGTAATCCAG CCCGAGTTAT TGGCGACCGA 
CGCGATAAAA AATAG
 
Protein sequence
MADIDYQAQH KKRLSWMPWL YFSLKPKHLS WAKPWQDDIQ QRLCQLETIH IGEQCFIAPQ 
AQLFAEPGRD ISIGNQCMIA ADVFMHGPIT LGNEVAINHG CSIDGGRNGI KIGNQTRIAN 
NVTIYAFNHG MSPSEPIYKQ PATSKGVVIG QDVWIGAQAG IVDGVTIGDC AVIGMGCIVT 
KDVPNFAIVA GNPARVIGDR RDKK