| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2718 |
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| Symbol | |
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| ID | 4279624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3268802 |
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| End bp | 3270598 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135537 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_751397 |
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| Protein GI | 114563883 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCAT TCTCGACTAC CAAAAAACGT AAAATTGTAC TGAGCATCAT GCTCATCATC
GGGTTATTAC TGACCCTAAA AGTTACGTAT TGGTATTTAC TTGAACAGGG CACAAAGTCC
ATTGCTGAAC AATCTGAAAA ACAAATCAAT GAACTGGTAA TTTTTATTGA TAACGCCCTT
TCACACTACG AAAATATTCC AGCAGTGCTC GCGCAAAATC CCATCTTAGA GCAAGGGTTA
CTTGATCAAC GCAATCCTCA AACAATCGAA AAACTTAACG CTTATTTATC TGAATTACAG
CAAGTTACAG AGTCGTCAGA TATTTACCTT ACTGATGCGC TCGGAGTTGC TATTGCCGCC
AGCAATTGGG ATGTACCCAA CTCTTTTATA AATCATGATT ATTCATTTAG GCCCTACTTT
ATTGATGCTA TATCAGGAAA GTCTGGACGA TATTATGCAG TCGGTACCTC ATCCAATAAG
CGCGGATTCT ACTTTGCTAA TCCGGTATAT CACAAGGGAG TGGTATTGGG TGTAGTGGTT
GTGAAAGTTG ATATAAGTTT GATTGAACAA CAAAGTAGTG GCATTGCCAT CGCAAGCCAA
TATGAGTTTA TGATTAGCGA TCCTGACAAT ATAGTGTTTC TTTCAAGCAT TAATAGTTGG
CGATTTAATT CATTAACGCC GCTAACACAG GCAAAACGTT TTGCACTTAA TTCATCAAAA
CGCTATGCAA ACCGACCCAT TGGTGAGCTT AGCATTACCC CTAATTTTGC CTTAGGTGAG
TCAAGCACGA CTCAGGTATA CCAAATCTCG TCTTCTGAAG GCAAAGAGAA GTATTTAGAA
CGCCACCAGT TAATGCCTAA TGCTAACTGG AATGTACATA TTCTAGCCCC CATGAAACCG
TTATATGAGT CTTTACCGCC TATTATGTTG CTAGCGGCGA CACTTTACTT ATTACTGGCT
TTGTTTATTA TTTACAGCTT AGAACGAAGA AAAAACTTTC TTCGGATGCG TCAAGCCCAA
AACCTATTAG AACAACGCGT GAAAGAACGC ACATTAGAGT TAGAACAAGC CAACACTCAA
TTAAAAGACA CTCAAGACGA GCTCATCCAA GCGGCAAAAC TCACGGTCAT AGGCAGTCTT
TCCGCCAGCA TAAACCATGA ACTCAATCAA CCGCTGGCCG CTCTGCGCAG CTATGCACAA
AACACTCAAA CCTTTATTGG CCGTAATATG ATTGAAGATG CCAGTAGCAA TATCAAAATC
ATGATAGAAC TAACTGATCG GCTTGCAGAT ATTATTGGTC AGTTTAAAAG CTTTACACGT
AAATCTCAGG GTAAAGACAA CGCTACTGAA ATTAATCAAT CAATTGAGCA AGCACTTACC
ATTGTTCAAC CTGAAATGGA TAAACAAGGC GTTAAGTTGT CGCTTAAATT ATTAACGGGC
AAATGCCAAA TATGGGGTGA CAGCGTCAGA TTACAACAAG TACTGGTTAA CCTTATTAGC
AATGCTATCG TTGCTATGCA TCAATCCACT GAGCGACAAT TGCAAATCAA AGTCTATTGC
GACAGTAAGG TCAATATAAG TATCCAAGAC AGTGGTCCTG GTGTAAGAGA AAGCCAGATG
AACAAAATTT TTGAACCTTA CTATACCACC AGTGAGCGTC AAGGATTGGG CTTAGGGTTG
TCCATCTCGC AGCGGATTAT TGAGTCAATG CAAGGTTCTA TTACTGTCGA GAACGCCATA
CCCGGTGGGG CTATTTTTCA TATCATTTTG CCACTTTATT TACGCGAGGA AGTGTAA
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| Protein sequence | MLSFSTTKKR KIVLSIMLII GLLLTLKVTY WYLLEQGTKS IAEQSEKQIN ELVIFIDNAL
SHYENIPAVL AQNPILEQGL LDQRNPQTIE KLNAYLSELQ QVTESSDIYL TDALGVAIAA
SNWDVPNSFI NHDYSFRPYF IDAISGKSGR YYAVGTSSNK RGFYFANPVY HKGVVLGVVV
VKVDISLIEQ QSSGIAIASQ YEFMISDPDN IVFLSSINSW RFNSLTPLTQ AKRFALNSSK
RYANRPIGEL SITPNFALGE SSTTQVYQIS SSEGKEKYLE RHQLMPNANW NVHILAPMKP
LYESLPPIML LAATLYLLLA LFIIYSLERR KNFLRMRQAQ NLLEQRVKER TLELEQANTQ
LKDTQDELIQ AAKLTVIGSL SASINHELNQ PLAALRSYAQ NTQTFIGRNM IEDASSNIKI
MIELTDRLAD IIGQFKSFTR KSQGKDNATE INQSIEQALT IVQPEMDKQG VKLSLKLLTG
KCQIWGDSVR LQQVLVNLIS NAIVAMHQST ERQLQIKVYC DSKVNISIQD SGPGVRESQM
NKIFEPYYTT SERQGLGLGL SISQRIIESM QGSITVENAI PGGAIFHIIL PLYLREEV
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