| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2710 |
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| Symbol | |
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| ID | 4279616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3255275 |
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| End bp | 3256561 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135515 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_751389 |
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| Protein GI | 114563875 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAG CTTCTTTAGC TACGACTTTC GCTGAATTTG GCCTGCATAC TCCATTGTTG
GCTAGATTAA CCGAGCTTAA ATACCTTCAG CCTACACCAA TCCAAGCTGA AACCATTCCT
AGCACATTAA CTGGTAAAGA CTTACTGGCA GGTGCCAATA CTGGCTCAGG TAAAACAGCG
GCTTTTGCAT TGCCGATATT ACATCAATTG GTGAGTCGTC GGGCAGCAAC ATCTGCCAAA
GGTAATTTTG TTAGTGCGTT AGTCTTGGTA CCAACGCGAG AACTTGCTAA GCAAGTTGCC
GACAGCTTTA AATCTTATGC GGTTCATTTA AATGGCGACA TTAAAGTGGT TGCTGCATTT
GGCGGTGTAT CTGTTAATAC TCAGATGCTA GCATTGCGTG GCGGTGCGGA TGTAGTCGTC
GCGACGCCAG GTCGTTTACT CGATTTAGTA TCGTCAAATG CATTAAAGCT GTCCCAAGTG
ACAACGCTAG TACTTGATGA AGCAGATCGA ATGTTAAGCC TTGGTTTTAC TGAAGAGCTG
ACTCAAGTAC TCAATTTACT TCCTAAGCAA AAACAAACGT TATTGTTTTC AGCGACTTTC
CCAGATGAAG TTCGCCAACT AACGCAAGCG TTGCTCGTTA ACCCGCTTGA GATACAATTA
CAAAGCGCTG AGGCGAGTAC GTTAGTACAA CGGGTAATGA CGGTTAATCG TGAAAAAAAG
ACCGCTTTAC TTGCACATTT ACTACAACAG CATCAATGGC GCCAAGTGTT GATTTTTGTT
GGCGCTAAAA ATAGTTGCAA TCATTTAGCT CAAAAACTGG CTAAACGTGG TATCACTGCA
GAGGTGTTTC ACGGTGATAA AGCCCAAGGC GCGAGAAGTC GTGTATTGGA AGGTTTTAAG
GCGGGTGATA TTCAAGTGCT CATTGCAACA GATATTGCTG CTCGTGGCCT TGATATTGAA
AAATTACCTG TAGTAATAAA TTTTGACTTA CCGCGCAGTC CAGCAGATTA TATGCATCGA
ATTGGTCGCA GCGGACGTGC GGGAGAGGTC GGTTTAGCGT TGACCTTGTT GTCGCATGAT
GAGTATCATC ACTTCTCTGT TATTGAGAAA AAGAATCAAA TTCGCCTTGA ACGTGAACAA
GTTAACGGAT TTGAGGCTGA TGATGTAGTG CCTGAAAGCG TACTGGAACA ACCTAAGCCA
ATGGCTAAGC CAGAAGGTAG CGGCAAGAAA AAACGTAAGA AGTTGTCCTC AGTTAATGTT
GATATTTGGG CTAAAAAACC AGATTAG
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| Protein sequence | MTQASLATTF AEFGLHTPLL ARLTELKYLQ PTPIQAETIP STLTGKDLLA GANTGSGKTA
AFALPILHQL VSRRAATSAK GNFVSALVLV PTRELAKQVA DSFKSYAVHL NGDIKVVAAF
GGVSVNTQML ALRGGADVVV ATPGRLLDLV SSNALKLSQV TTLVLDEADR MLSLGFTEEL
TQVLNLLPKQ KQTLLFSATF PDEVRQLTQA LLVNPLEIQL QSAEASTLVQ RVMTVNREKK
TALLAHLLQQ HQWRQVLIFV GAKNSCNHLA QKLAKRGITA EVFHGDKAQG ARSRVLEGFK
AGDIQVLIAT DIAARGLDIE KLPVVINFDL PRSPADYMHR IGRSGRAGEV GLALTLLSHD
EYHHFSVIEK KNQIRLEREQ VNGFEADDVV PESVLEQPKP MAKPEGSGKK KRKKLSSVNV
DIWAKKPD
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