| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2671 |
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| Symbol | |
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| ID | 4279578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3206098 |
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| End bp | 3208887 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135476 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_751350 |
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| Protein GI | 114563837 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1025] Secreted/periplasmic Zn-dependent peptidases, insulinase-like |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.266963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCTGAAT TTCCAGCTGT TTATAAAAGC CAAAATGACC ATCGCCAATA CCAATATCGA
GTGTTGAACA ATCAACTTCG AGTGTTATTG GTTGAAGACA TGCAATCAAA TCAAGCCGCC
GCATCGATGG CTGTGAGTGT TGGTCATTTT GACGATCCGG TTGAACGGCC TGGTATGGCG
CACTTCCTTG AGCACATGTT ATTTTTAGGC ACCGAGAAGT ATCCAGATTC AGGTGAATAC
CACGCTTATA TTAATCAACA TGGTGGCAGT AATAATGCTT GGACAGGCAC AGAACAAACT
AACTTTTTCT ATAGTATTAA TGCTGAATCC TTAGAAGGTT CATTAGACCG ATTCAGCCAA
TTTTTCATTG CCCCAAAGTT TGACTTAGAG TTAGTTGATC GTGAAAGGCA GGCAATCGAA
TCTGAATTTA GCTTAAAGTT AAAAGATGAT ATTCGCCGTG TTTACCAGGT TCAAAAAGAA
ACCGTTAATC CAAAACATCC ATTTTCAAAG TTCTCTGTCG GTAACCAAAC AACCTTAGCG
GGTAAACAAG CAGACATTCG GGATGAATTA CTGGCTTTTT ATCAACAACA TTACAGTGCC
AATATCATGA CATTGTGTGT TGTCGCCCCA CGCCCTATTG CAGAGCTAGA CACCATCGTA
AAAAAATATT TCTCAAATAT TATTAATAGA AATGTAAGTA AACACTATCC TCAAGAAGCA
ATGATAACGA AGGACCAACG ACAAAAGCAT ATACAAATTG TACCTTTGAA AGATCAAAAG
CGAGTCAGTA TTTGTTTTTC TCTGCCAGAG ATAGATCAAT TTTATAAGCG TAAACCACTC
ACCTTTATCA GCCATTTGCT CGGTAATGAA AGTCCGGGGA GTTTACTGTC CTATTTAAAA
GTGCAGGGAC TCGCTAATAA CTTATCTGCT GGCGGTGGGG TTAATGGTTA CAATTTCAAA
GATTATTCAA TCAGCATACA ATTAACCGAC AAAGGATTTG CAGAGCTTGA TGAAGTGGTA
ACTTGTGTAT TTGAATACAT TGAACTGATT AAGCTGCGAG GTGTACAAGC CTGGCGTTAC
CAAGAGCGAG CCAATTTACT TGACACAGCG TTTCGATTCC AAGAACAAAT CAAAACCTTG
GATTTAGCGA GTCATCTCAG CATCAACATG CACCATTACG ATATTGAAGA CATTATTTAT
GGCGACTATC GCATGGATGA AATGCTTGAA GATGAAACAA TACAGCTACT GTCTATGATG
TCGACAACCA ATATGCGCTT ACTTACAGTA GCAAAAGAAT CGCAAGTCGA TACTCAGGCT
AAATGGTACG ACACTCCATA TCAAGTGAGA TCATTACAAC CTCAACAAAT AGCAAAATGG
TCTTCCGTGA CGGTAAGAGA TTCACTTCAA CTTCCGGAAA GAAATCCGTT TATTGTCGCA
AACCCGCAAG CTCGGGCAGA CAAAAGCGAT ACTCCTGTAC CCACTATTGT TGCAGAAGGT
GAAGGTTACC GTATTTGGCA TAAAAAAGAT GATGAATTCA ATGTTCCTAA AGGACATTTA
TACTTATCGT TAGACTCAGA TCAAGCGAGC TCAACCCCTA AACAAGCAGC ATTAACAAGG
CTGTACGTTG AAATGCTTAT CGATTATCTG ACAGAACCAA CATACCAAGC AGAGGTTGCT
GGCCTTAACT ACAATATTTA CCCCCACCAA GGCGGCATTA CCCTGCATTT AACCGGTTTT
ACAGGTAACC AAGAAAAACT CCTCACTCTG ATTATTAACA AAGCCCGAGA GCGAAACTTT
ACCGAACAGC GCTTTAACAT GATTAAAAAT CAGATATTGC GCAGTTGGAA TAATGTTGCT
CAAGCTAAAC CAATATCACA ATTATTTACT AGTTTAACGG TGTCGCTGCA AAAAAGAAGT
TTTGAGCCAG CAAGAATGGC TGAAGAACTT ACGCTACTAA CACTTGATGA TTTGCATAAT
CATGTCAGCG CATTTTACAA AAAGGTTTAC CTCGAAGGTT TGGTATACGG AGATTGGCTG
GTTGAAGAAG CGCAACAACT CGGCAAGCGT TTGCAGCATC TATTGTCATT AGTCACTAAA
CCAAGTGCAG AATCCTCCCG TGAACTTATT AACCTCGATA AAAGAGGTTC ATTACTTCGC
GAAAAAGCCA TTTCCCATCA AGATAGTGCG ATTATTGTTT ATTATCAATC TCGGATGGCA
ACACCAGAAC GTGTGGCGTT ATTCAGTTTA TTAAACCATA CAATGTCATC TACCTTTTTT
CATGAGTTAC GCACTAAACA ACAATTAGGC TACATGGTTG GGACAGGTTA TTTACCGTTA
AACCGACATC CTGGGATGAT TTTTTATGTG CAGTCCCCTA CTACAGGTCC AAGACAACTG
CTCGAAGCAA TCGACGAGTT CATTGCCGAC TTTAATTATG CCGTTATGCA AATAACCAAT
GAACAATGGG AAAGCACTAA GCAAGGTATG ATAAGTCAAA TTATGGAACA CGATACCAAC
CTAAAAACAC GCAGCCAACG TTATTGGGTG AGCTTAGGAA ACCGCGATTA TGGATTTAAT
CAACGTGAAA TGGTCGTAGC GGAAGTCGAA AAGCTCACCA GAGCTCACTT GATAAAGTTT
ATGGTGGCTC ACATGCGCAG CAGAGATTGT GACCGCTTAG TATTGTTTAA CAGTGGTGAA
CAACATCGCA GTCAAACAAG CTTACGTTCA GATAACATGA TAGTCGACTT AAAAACCTTC
AAACACCAAG CTGATAAATT TCAATTTTAA
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| Protein sequence | MPEFPAVYKS QNDHRQYQYR VLNNQLRVLL VEDMQSNQAA ASMAVSVGHF DDPVERPGMA
HFLEHMLFLG TEKYPDSGEY HAYINQHGGS NNAWTGTEQT NFFYSINAES LEGSLDRFSQ
FFIAPKFDLE LVDRERQAIE SEFSLKLKDD IRRVYQVQKE TVNPKHPFSK FSVGNQTTLA
GKQADIRDEL LAFYQQHYSA NIMTLCVVAP RPIAELDTIV KKYFSNIINR NVSKHYPQEA
MITKDQRQKH IQIVPLKDQK RVSICFSLPE IDQFYKRKPL TFISHLLGNE SPGSLLSYLK
VQGLANNLSA GGGVNGYNFK DYSISIQLTD KGFAELDEVV TCVFEYIELI KLRGVQAWRY
QERANLLDTA FRFQEQIKTL DLASHLSINM HHYDIEDIIY GDYRMDEMLE DETIQLLSMM
STTNMRLLTV AKESQVDTQA KWYDTPYQVR SLQPQQIAKW SSVTVRDSLQ LPERNPFIVA
NPQARADKSD TPVPTIVAEG EGYRIWHKKD DEFNVPKGHL YLSLDSDQAS STPKQAALTR
LYVEMLIDYL TEPTYQAEVA GLNYNIYPHQ GGITLHLTGF TGNQEKLLTL IINKARERNF
TEQRFNMIKN QILRSWNNVA QAKPISQLFT SLTVSLQKRS FEPARMAEEL TLLTLDDLHN
HVSAFYKKVY LEGLVYGDWL VEEAQQLGKR LQHLLSLVTK PSAESSRELI NLDKRGSLLR
EKAISHQDSA IIVYYQSRMA TPERVALFSL LNHTMSSTFF HELRTKQQLG YMVGTGYLPL
NRHPGMIFYV QSPTTGPRQL LEAIDEFIAD FNYAVMQITN EQWESTKQGM ISQIMEHDTN
LKTRSQRYWV SLGNRDYGFN QREMVVAEVE KLTRAHLIKF MVAHMRSRDC DRLVLFNSGE
QHRSQTSLRS DNMIVDLKTF KHQADKFQF
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