Gene Sfri_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2618 
Symbol 
ID4279525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3133476 
End bp3134012 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content40% 
IMG OID638135414 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_751297 
Protein GI114563784 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.397987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATAA ATCTTTATAG TGATCGGCTT AAATTACGAA ATTTACTGAG CAGGGATTGG 
GATTTTTTTC TTCGCTTACA TCTTGATAAA GATGTTAATC AATATATTCG AAGTATTGAA
CCTGAATCAG ATATAGTCGC TAAATTTGAG CAGCGTAAAG CGGTATGGCT TTTTGAGTCA
GGAGATTGGT TAACGCTTGT TATTGAGCGA ATTGATAATA GTCAGGCCGT AGGACTTATT
GGTTTTAGAT GTGATGATGC ACAGCTAAGG CGGGCTGAAG TAGGTTATTT AATTGCGCCA
GAACAGCAAG GATTAGGGTT TGCCAGTGAA AGCTTGCTCG CGGTAACCGA TTGGGGGGCA
CTACAATTCA GTATGCATAA ATACATTGGT ATTTGCGCTC ATGAAAATAC TGCTTCGCGA
AAAGTATTAG AGAAGGTGGG CTTTGTTCTG GAAGGGACAC TAAAACAGAA TAACTGTGTT
GATGGTAAAT GGTCCGATGA TTGTTATATG GGGTTGTTGA CCGCCCAGAG AACATAA
 
Protein sequence
MDINLYSDRL KLRNLLSRDW DFFLRLHLDK DVNQYIRSIE PESDIVAKFE QRKAVWLFES 
GDWLTLVIER IDNSQAVGLI GFRCDDAQLR RAEVGYLIAP EQQGLGFASE SLLAVTDWGA
LQFSMHKYIG ICAHENTASR KVLEKVGFVL EGTLKQNNCV DGKWSDDCYM GLLTAQRT