| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2613 |
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| Symbol | |
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| ID | 4279520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3127722 |
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| End bp | 3127877 |
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| Gene Length | 156 bp |
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| Protein Length | 51 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135409 |
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| Product | putative tRNA-(MSA)-hydroxylase |
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| Protein accession | YP_751292 |
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| Protein GI | 114563779 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4445] Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGCAAT TACTTGTCCC TATTTACGAC TTTTTAGGTT GTGAGACGCC AAACCGTTGG
GTCGAACAAG CTAAACAACC CGAACAACTC ACTGCATTAC TGATTGATCA TTGCAACTGT
GAGCTTTATG GTAGTATGTG CACATCATGT ATTTAA
|
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| Protein sequence | MQQLLVPIYD FLGCETPNRW VEQAKQPEQL TALLIDHCNC ELYGSMCTSC I
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