| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2567 |
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| Symbol | |
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| ID | 4279474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3071340 |
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| End bp | 3072089 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135360 |
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| Product | ABC transporter related |
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| Protein accession | YP_751246 |
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| Protein GI | 114563733 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTAATA ATATCGATCG AAATACCAGT GCCATTACTG TAACTAACCT CAATAAAACT
GTCGTGACCC AAGAGGGAGA GTTGACTATC CTCAACGGCA TTAATATAGA AGTCAAGCAA
GGAGACAGTA TCGCCATTTT GGGGCCATCA GGTTCAGGTA AGTCGACACT ATTGGGGTTA
CTTGCAGCAT TAGATACTCC TACCTCTGGT GAGATAGTGT TAGATGGCGT GGCATTATCT
GGATTAAATG AAGAGCAAAA AGCAGCGCTT CGTAAGCAAA AAGTCAGTTT TATTTTTCAG
TCATTTATGT TGGTTGATAC CTTAACCGCG CTTGAAAACG TTATGCTACC CGCAGAGCTT
GCTGGGGTGA AAGATGCCAA GCAGAAAGCC CAAACCATGC TTAATCGCGT TGGTTTATCT
CATCGATTAA ATCATTTACC TAAACAATTA TCGGGTGGTG AGCAGCAACG TGTGGCGATT
GCCAGAGCTT TTATTTGTGA ACCCAAAGTG CTGTTTGCAG ATGAACCAAC AGGCAACTTA
GACAGTGTAA ATGGCGATAA AATTGCTGAT ATGTTGTTTG CGTTAAACCA AGAAAGTGAC
ACCACGTTGG TGTTAGTGAC TCATGATTTG CATTTAGCAA AACGTTGCGC ACGCCAATTA
GTGATGGAGA ATGGTCATTT ATCTGAACCA TACGCAGATA ATCTGAAGGC TGCCCATGTG
AGCGCGGAAC ATGCTGAGGA GGTTAACTAA
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| Protein sequence | MSNNIDRNTS AITVTNLNKT VVTQEGELTI LNGINIEVKQ GDSIAILGPS GSGKSTLLGL
LAALDTPTSG EIVLDGVALS GLNEEQKAAL RKQKVSFIFQ SFMLVDTLTA LENVMLPAEL
AGVKDAKQKA QTMLNRVGLS HRLNHLPKQL SGGEQQRVAI ARAFICEPKV LFADEPTGNL
DSVNGDKIAD MLFALNQESD TTLVLVTHDL HLAKRCARQL VMENGHLSEP YADNLKAAHV
SAEHAEEVN
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