| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2560 |
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| Symbol | |
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| ID | 4279468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3064587 |
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| End bp | 3065486 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135354 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_751240 |
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| Protein GI | 114563727 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAATC AACAATGGTT AACAACATTT ATTAAACTCG TCGAAGTTGG GCATTTTACT
CATACTGCAG AGCAACTTTT TATGACGCAA CCTGGCGTGA GTCAGCACAT TAAAAAGCTC
GAGCAGCAAG TGGGTGTTGA TTTACTCATT AGAATTGGAA AAAGCTTTGA GCTAACTGAA
GCTGGAATAG TGTTGTATCA ACAAGCATTA GTTTGGCAGC AGCAGCAACA GCAAGTTTTG
TCGCAATTAG CGGTTGATGA TGAGCATGTC GGCGATTGCC GTTTAGCGTG TTCGGGATCG
ATGGCGTTGC TTTTATATCC TCACCTTATT GACTATCAGT TGCCATATAG TCAATTACAA
ATCTATCTGG AAGCGGCGCC TAATAAACGC ATTATTGACA GTGTTATGAC CAATACCATT
GATGTGGGTA TAATTACGCA GCCGATTAAT ATGGATGAGC TGGTGGTGAC TCCATTAGCT
GCGCAGTCTC TGTGTCTGGT GTTACCTCAG TCGTACTTAC ATCAATCGGT TACATTTGAA
CAGCTCATGG AGCTTGGAAT GGTGAGCCAC CCTGATGCGA TGCATTATTG GTCGCAAATA
GTCGGCCAGT ATTTTACTAA AAAACAAGCG TTGGCATTGC AGGTGCCCAT TCGCAGTTAC
GTTAATCAGT TGAACCAAAT TCTTGTGCCA GTGGCTAAAG GGCTGGCATT TGCTGTACTA
CCACAATTTG CTGTTGACCA TTTTGGCCAA CAACAGCATA TCCGCGTAGC ATCTTTTACC
ACCGAGCAAG CCAACAATGT GGTGGTCAGT GAGCCATTGT TCATTATTTA CAAAAAACAC
CGACCACTTG CGCGTCGCTA TGGACCGATA ATCGACAAAA TTAAACAGTT GGTTAAGTGA
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| Protein sequence | MLNQQWLTTF IKLVEVGHFT HTAEQLFMTQ PGVSQHIKKL EQQVGVDLLI RIGKSFELTE
AGIVLYQQAL VWQQQQQQVL SQLAVDDEHV GDCRLACSGS MALLLYPHLI DYQLPYSQLQ
IYLEAAPNKR IIDSVMTNTI DVGIITQPIN MDELVVTPLA AQSLCLVLPQ SYLHQSVTFE
QLMELGMVSH PDAMHYWSQI VGQYFTKKQA LALQVPIRSY VNQLNQILVP VAKGLAFAVL
PQFAVDHFGQ QQHIRVASFT TEQANNVVVS EPLFIIYKKH RPLARRYGPI IDKIKQLVK
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