| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2512 |
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| Symbol | |
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| ID | 4279421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3008292 |
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| End bp | 3009191 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135307 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_751193 |
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| Protein GI | 114563680 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACTT CAGATCTGCA TTTATTCATT CGAATAGTTG AAACGGGCAG CATAACAGAA
TCTGCCAAAC AGCTTAGCAT TACGCCTCCT GCCGTCAGTT CAGCGCTGCG CCGATTAGAG
AAACAGCTCG ATGTTCAGTT GTTTATAAGA ACAACCAGGC AACTGCGTAT TACACCTGAA
GGTGAGCAAT TTCTGTTTCA CTGTCGAGAA GCGTTGGAAA GTTTAGCGCA AGGGCAAATA
GCGGCTCATC AAATACAAGG GAAAATAAGT GGAAATTTAC GGCTATCAAT ATCATCAGAT
TTAGGCCGTA ATATCGTTTT ACCCTGGATG ATGGAATTAA CAAAGCAACA CCCCACCCTA
TCAATAGACT TGAATATTGG TGATTCTCTT TCTGATTTTT TCCTCGATAA CGTTGATATT
GCCCTTCGAT ACGGTAAGCC GGAAGACTCA ACGATGGTTT CATTTCTTAT TGCAACCATG
GACAGAATTA CTTGTGCATC TGCAGATTAC CTATCTAAAT GGGGTGAACC TTTACATCCT
GAAGAACTGA GAACACACAA TTGTTTATTG CATAAAAAAA AGGGATATTT ATTTAATCAG
TGGGAGTATT CGAATCAATC AGGAAACCAC AAAATCAAAG TCGACAGTAA TAATATTAGT
AATGATACTG ATATTGTTCG ACGATGGGCT ATTTTCGGAC AAGGCATTGC ATATCGTGCA
GAAATAGATG TTCTTGCTGA TTTACGCAGT GGAAAATTGG TACAAATCCT GTCTGACTAT
CAATCCCCTC CAGTAGAGCT ACATCTTATT TGTCCAAGCC GAAAACAGGT AACTCCCGCT
GTATTAGCGT TAAGAGAATT ACTAAGAGGC AACTGTAGCA AAATGCTGGC AGCTATCTAG
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| Protein sequence | MNTSDLHLFI RIVETGSITE SAKQLSITPP AVSSALRRLE KQLDVQLFIR TTRQLRITPE
GEQFLFHCRE ALESLAQGQI AAHQIQGKIS GNLRLSISSD LGRNIVLPWM MELTKQHPTL
SIDLNIGDSL SDFFLDNVDI ALRYGKPEDS TMVSFLIATM DRITCASADY LSKWGEPLHP
EELRTHNCLL HKKKGYLFNQ WEYSNQSGNH KIKVDSNNIS NDTDIVRRWA IFGQGIAYRA
EIDVLADLRS GKLVQILSDY QSPPVELHLI CPSRKQVTPA VLALRELLRG NCSKMLAAI
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