| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2497 |
|---|
| Symbol | |
|---|
| ID | 4279407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 2984943 |
|---|
| End bp | 2985872 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638135293 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_751179 |
|---|
| Protein GI | 114563666 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3183] Predicted restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAA CGGTTATCGA AATAGGTGAA ATAAACAAGT GTCAGTCATT ACTACTCGAA
AATTTAAAAA ATAACCTTTA CCTTTCTGGG AAATTTAATA TTGGTTTTCC AGGTGGAAGT
TGGACTGAAA CTATCCAATA TAATGAGGAC ATTTGGTTCT TACATCATGA AATTGGTGGT
GAAGAAAAAT CACCACGTTT CTGGAATGGC TTTGGTTTAG TACAAGAACT TAGTAGTAAT
AAATCAAACA ACATTGTTGT TGAGATTAAT ATCCCTACTA ATGGGATTAA TAGAAAAGTT
GCAGGTTTTT ATGCAAAAAA TGAAAGTGGT GAAATTGGGC TGTTTCACCG TGGTGGCTTA
GGTGGTGGGC GGAAAGGTAT AGGTAAGCAA GCATTTCTCA GCTGGTCTTC CTATGAATTA
ACTTCAGTAT CAACCAATAG TGCAAAAGAA AGCGCCATAC TAGTTGGCTT AATTGAAAGT
GATGACTTTA CCGTTAAGTT ACATGACTTT TTAATTAATA TTGCAAACTT TAAGCAATTA
GCTACAACTG GAGAAATAAA TGAAGCTACA TTTATTTCTG ATGATGAACT TTGGGAGCGT
ATTTGTACTG AAAACCCTAA ACGAAAATCC CCAAAGAAAA CGACAACAGA AACAGTAGGA
TATGAAAGAA GTGAATTTGT AAAAGAGTAT GCATTAAGGC ATGCAAATGG AAAATGCCAG
CTTTGTAATA ATGCCGGTCC TTTTGCGACA AAATCAGGTA GAAATTTTTT GGAGGTTCAT
CATATAGATT GGCTTTCTAA AGGAGGTCTC GATATGCCCG AGAATGTTGT TGGATTATGT
CCTAATTGTC ATAGAAAAAT GCATAACATA AATGACGCTA AAGATATTAA AAAATTAAAA
TCCGCAGTAG TTATCTTAAA ATCGCACTAA
|
|---|
| Protein sequence | MFKTVIEIGE INKCQSLLLE NLKNNLYLSG KFNIGFPGGS WTETIQYNED IWFLHHEIGG
EEKSPRFWNG FGLVQELSSN KSNNIVVEIN IPTNGINRKV AGFYAKNESG EIGLFHRGGL
GGGRKGIGKQ AFLSWSSYEL TSVSTNSAKE SAILVGLIES DDFTVKLHDF LINIANFKQL
ATTGEINEAT FISDDELWER ICTENPKRKS PKKTTTETVG YERSEFVKEY ALRHANGKCQ
LCNNAGPFAT KSGRNFLEVH HIDWLSKGGL DMPENVVGLC PNCHRKMHNI NDAKDIKKLK
SAVVILKSH
|
|---|
| |