Gene Sfri_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2488 
Symbol 
ID4279399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp2973878 
End bp2974573 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content42% 
IMG OID638135284 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_751171 
Protein GI114563658 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA TTGAAGTATA TCCCAATGCG ATAAGTAATG ACTTATGTGA TCGTTTAATT 
GCGGCATTTG AAACGCATCC GAGTGTGGGT CCTGGTCATA CGGGTTTTGG TGTAGATACC 
GAGAAAAAGC GCAGTCGTGA TTTAATGCTA GATGCTTTTG ATGATTTAGC CGAATTAAAA 
AATGAACTCT TAGCGTCGAC ATTTACCCAT ATTAGCGATT ATTTTACTCA ATACTCATTA 
ACGTTAATGG GGGCTGTTTC TGTACAAGTA GCAGATGAAA ATGGTCAACC ACAAACGTTA 
ACGCCTGATA ATTTTGATGC GTTAGGTCGG CCAAGGGCGG CGGCATTAAC CAAGTATTTG 
TACCGCAGTG GTACGATTAA TGTGCAGCAT TATCAGCAAG GTGTGGGTGG ATATCCGCAT 
TGGCATTCAG AGCAGTATCC ACAGAATGGC CATAATGAGG CGCTTCATCG GGTGGTGTTA 
TACATGTTTT ACCTGAATGA CGTTGAAGAG GGCGGTGAAA CGGAGTTTTA TTATCAACAA 
CGTAAAATAA GCCCTAAAAA AGGCACTATG GTGATTGCTC CAGCGGGTTT TACTCATAGC 
CATCGTGGCA ATGTGCCCAT TAGTAACGAT AAATATATTG CGACTTCTTG GGCGATGTTT 
AATCGTGCCG AGCAACTTTA TGCGCCACTA AGTTAG
 
Protein sequence
MDFIEVYPNA ISNDLCDRLI AAFETHPSVG PGHTGFGVDT EKKRSRDLML DAFDDLAELK 
NELLASTFTH ISDYFTQYSL TLMGAVSVQV ADENGQPQTL TPDNFDALGR PRAAALTKYL 
YRSGTINVQH YQQGVGGYPH WHSEQYPQNG HNEALHRVVL YMFYLNDVEE GGETEFYYQQ 
RKISPKKGTM VIAPAGFTHS HRGNVPISND KYIATSWAMF NRAEQLYAPL S