| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2459 |
|---|
| Symbol | |
|---|
| ID | 4279370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 2925511 |
|---|
| End bp | 2926713 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638135255 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_751142 |
|---|
| Protein GI | 114563629 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTAAAG CAGAATTAAC ACAAATACCT GTTTCGCAAA TGGTTATCGG GTTAACCGTT
AAGCTGCCTT TGTCTTGGAC AAACCATCCT TTTTTTCGCA GTAAAGTTAA GCTTGAGCAA
CAAGTGCAAA TCGAGATGAT CAAAGGCCTC GATGTGTCAT TTGTCTATGT GATTGAAGGC
CATGATTTAT TGCCCCACGT TTCTGAACCT GTTGAAATTG AACAACCAGA AGAGGTTGTT
GAACAAGAAA TTGATTATCG ACCATTGGCT AAAAAAAGCA TGCGAATTAG CCAGCAACGC
TTTGTAAAAT CGGTTAACGA TAGTAGGACT GTTTTTGGCA AAATTGTTAG CGACCCTGAG
GGGGCGTACC GAGAAGCTGC CACCTTAGTC GAAGATTTAG TCGATCATTT GTATGAAAGT
GAAACCCCTC AACTCACGAT CGTAGGCAGT GGTGAAATTG ATGTCAGTGT GACTCAACAT
GGTATTTCAG TTGCAGTACT TTCTATGATG ATTGCCCACT CGTTAGTACT GTCGAAAAAA
GATGTTCGTG ACATTGCATT AGGTAGCTTA TTTCACGATA TTGGCAAACT CAAAGTGCCA
GATGCTATAC GTCGTAAAAA ACGTGGTGAT TTAAGCGATC ATGAAATTAA TTTTTTAAAA
ATGCACCCCA ATTTTGGTTA CGACATGCTT AACCGCACCG GATTATTCCC TGAAGCTATG
TTGGATATCG TACTCCATCA TCACGAGTTT ATTGATGGCA GCGGATTCCC CAATCAGTTA
ACCGAAGCTA AAATATTACT CACTACACAA GTGGTATCTT TAGCTAACGA TTATGAAACC
TTGTTAAACT TACATCGCAC TCCACAAATA GCTTTGGGGA TTTTATTTAA AACCCATAGT
GGCAAACATG CTGATAATCT AATTGCTGTA TTAGTTAAAA TTTTAGGCAT TTATCCTCCA
GGAACCATTG TGCGCTTGAC TGACGATAGT ATTGCCAAGG TGATGATGAC CACCGCTGAC
GTCAAGCAGC CGCATGTGTG GTCTTGTAAT CTCAGTGGTG GAGAACCCAG TTTTCGTTTT
TTAATTAACG AAGATGTGCA AGTTCAAGAA GTGATGAAAT TAGATGAGTT AACTGATGGT
GCGGTCAAAA CACTACAAGC GAACAACCCA ATTAGTTTTT ACTTCAATAA CTTCGATCAT
TAA
|
|---|
| Protein sequence | MAKAELTQIP VSQMVIGLTV KLPLSWTNHP FFRSKVKLEQ QVQIEMIKGL DVSFVYVIEG
HDLLPHVSEP VEIEQPEEVV EQEIDYRPLA KKSMRISQQR FVKSVNDSRT VFGKIVSDPE
GAYREAATLV EDLVDHLYES ETPQLTIVGS GEIDVSVTQH GISVAVLSMM IAHSLVLSKK
DVRDIALGSL FHDIGKLKVP DAIRRKKRGD LSDHEINFLK MHPNFGYDML NRTGLFPEAM
LDIVLHHHEF IDGSGFPNQL TEAKILLTTQ VVSLANDYET LLNLHRTPQI ALGILFKTHS
GKHADNLIAV LVKILGIYPP GTIVRLTDDS IAKVMMTTAD VKQPHVWSCN LSGGEPSFRF
LINEDVQVQE VMKLDELTDG AVKTLQANNP ISFYFNNFDH
|
|---|
| |