| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2458 |
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| Symbol | |
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| ID | 4279369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2924677 |
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| End bp | 2925483 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135254 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_751141 |
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| Protein GI | 114563628 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAG TTACTATTAT CGGATGTGGT TGGTTCGGTT TGCCGCTCGC CACACAATTA
GTTAAGCAAG GTATTAAGGT AAAGGCTTCA AAACGTCACC CTGAAGACTT AGTCCAATTA
CAGCAAGCCG GTGTTGATGC TTATCAATTA AATTTAGCCA ATGTGAATAG CCAGGCAAAA
AACTCGTCTT TATTCGATGC AGACGCCATC GTGATTAACT TACCACCGGG ACTTAGGCGA
GGCGAAACTG ATTATCTAGG CTATTTAACT CAGTTAATAA CCTTGATGGG TGAACACCAA
TATCAAAAAA TTATTTTTAT CAGTACGACT GGGGTTTATC CTTCGCTAGA TCAAACAGTA
ACCGAACAAG ATGCTGCAGC TTTTAATGAT ACCAGTCGCA CATTATTACA AGCAGAGGCA
ATGTTTTCCG CTATGAAAAA TAGCTGCATT GTAAGATTCT CAGGCTTGGT AGGGCCTAAA
CGGCATCCCG GACGTTTTTT TGCCGGAAAA ACCGATGTCA GTGGCGCCAA TGTTGCGGTT
AATCTGGTGC ATTTAGATGA CTGTATTGCT GCTGTTAGCT TAATTCTTTC TCGCAACGAT
ACTTTACCGA TTTATAATCT TGCTGCAAAC GCTCACCCTA CTCGTGGGGA GTTTTATGTT
GCTGCTGCAG AGCATCTTGG ATTAACTGCG CCAGAGTTTA ATCAGCAACA ACAACCCAAT
AAAACTATCG ACGGTCAGTT AATTTGTCAT CATTTAGGGT TTACATATGC GTTTAATAAT
CCATTCAAAA TGCTTGATGC TTGCTAA
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| Protein sequence | MNTVTIIGCG WFGLPLATQL VKQGIKVKAS KRHPEDLVQL QQAGVDAYQL NLANVNSQAK
NSSLFDADAI VINLPPGLRR GETDYLGYLT QLITLMGEHQ YQKIIFISTT GVYPSLDQTV
TEQDAAAFND TSRTLLQAEA MFSAMKNSCI VRFSGLVGPK RHPGRFFAGK TDVSGANVAV
NLVHLDDCIA AVSLILSRND TLPIYNLAAN AHPTRGEFYV AAAEHLGLTA PEFNQQQQPN
KTIDGQLICH HLGFTYAFNN PFKMLDAC
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